RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 TNFSF8P32971 234 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 CD79BP40259 229 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 GPR4P46093 362 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 RGS8P57771 180 aaPredicted RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 KIR2DS3Q14952 304 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ALG11Q2TAA5 492 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SLC30A6Q6NXT4 461 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 FIGLAQ6QHK4 219 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 KIAA1324Q6UXG2 1013 aaKnown RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 RASSF6Q6ZTQ3 369 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 GDF7Q7Z4P5 450 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 OR4K14Q8NGD5 310 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 OR4Q3Q8NH05 313 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 TMEM255BQ8WV15 326 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 TMEM203Q969S6 136 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 MCHR1Q99705 422 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 FBRSQ9HAH7 460 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 EVA1BQ9NVM1 165 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 MRPS18AQ9NVS2 196 aaKnown RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 IL20RAQ9UHF4 553 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF443Q9Y2A4 671 aaPredicted RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 A0A075B6Q4 140 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF670-ZNF695F2Z2N8 137 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ZSCAN9O15535 394 aaPredicted RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 PRODHO43272 600 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 AQP9O43315 295 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 MED26O95402 600 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 APBB3O95704 486 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 CBX3Q13185 183 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SUZ12Q15022 739 aaKnown RBP14.42□□□□□ -0.1
UPF3B-202ENST00000345865 NRMQ8IXM6 262 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 TMEM52Q8NDY8 209 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ANKK1Q8NFD2 765 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SLC22A18Q96BI1 424 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 RNFT2Q96EX2 444 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SERINC2Q96SA4 455 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SNTG1Q9NSN8 517 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ERVK13-1Q9NX77 482 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ACTR10Q9NZ32 417 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SCML1Q9UN30 329 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 NCKAP1Q9Y2A7 1128 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 SLC22A7Q9Y694 548 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 LRP4O75096 1905 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 KLF4O43474 513 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 LDB3O75112 727 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 CPEP16870 476 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 HNRNPA2B1P22626 353 aaKnown RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 RNF144AP50876 292 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SRP54P61011 504 aaKnown RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 MAPK14Q16539 360 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 C3orf38Q5JPI3 329 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF836Q6ZNA1 936 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 GDPGP1Q6ZNW5 385 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 PLEKHM3Q6ZWE6 761 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ZBTB8BQ8NAP8 495 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 POGLUT1Q8NBL1 392 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ACOT11Q8WXI4 607 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 FAM3CQ92520 227 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SLC41A3Q96GZ6 507 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 RACGAP1Q9H0H5 632 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 TPK1Q9H3S4 243 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SMURF1Q9HCE7 757 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 INIPQ9NRY2 104 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 FBXO34Q9NWN3 711 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 CHCHD3Q9NX63 227 aaKnown RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 WDR45Q9Y484 360 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 DUXAA6NLW8 204 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 CDC42EP2O14613 210 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 MTNR1AP48039 350 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 TPMTP51580 245 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF136P52737 540 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 MXD1Q05195 221 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ADAM15Q13444 863 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 HTR4Q13639 388 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 C1DQ13901 141 aaKnown RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 DECR1Q16698 335 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 ARHGAP11BQ3KRB8 267 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SPANXN2Q5MJ10 180 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SLC36A4Q6YBV0 504 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 USP53Q70EK8 1073 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 PIGXQ8TBF5 258 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 GATAD2BQ8WXI9 593 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SDF2Q99470 211 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 TCEAL2Q9H3H9 227 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 RERGLQ9H628 205 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 MTHFD2LQ9H903 347 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 CPNE5Q9HCH3 593 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 FGF20Q9NP95 211 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 C14orf119Q9NWQ9 140 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 TXNL4BQ9NX01 149 aaKnown RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 PHF11Q9UIL8 331 aa14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SPIN1Q9Y657 262 aaPredicted RBP14.41□□□□□ -0.1
UPF3B-202ENST00000345865 SPEGQ15772 3267 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 KDM4EB2RXH2 506 aaPredicted RBP14.4□□□□□ -0.1
UPF3B-202ENST00000345865 AP3D1O14617 1153 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 B3GALT2O43825 422 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 SSX4O60224 188 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms