RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GPR50Q13585 617 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 OR52E8Q6IFG1 317 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 B3GLCTQ6Y288 498 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 TEX19Q8NA77 164 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 DPEP3Q9H4B8 488 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 OTOL1A6NHN0 477 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-201ENST00000345617 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-201ENST00000345617 CD1DP15813 335 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 ARSBP15848 533 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SNX18Q96RF0 628 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 A0A0G2JN53 185 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 MSMO1Q15800 293 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 MAMDC2Q7Z304 686 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SLC30A7Q8NEW0 376 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 DUSP11O75319 330 aaKnown RBP18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SERPINE2P07093 398 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 GPR176Q14439 515 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 OR1S1Q8NH92 325 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 TFAP2CQ92754 450 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 B3GALT1Q9Y5Z6 326 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 ZNFX1Q9P2E3 1918 aaKnown RBP18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SLC31A1O15431 190 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 GKP32189 559 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 FBXL22Q6P050 247 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 HORMAD2Q8N7B1 307 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 SEMA6DQ8NFY4 1073 aa18.42■□□□□ 0.54
HDAC4-201ENST00000345617 IMPA1P29218 277 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 IGFN1Q86VF2 1251 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 KRTCAP2Q8N6L1 136 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 NUP43Q8NFH3 380 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 BRIX1Q8TDN6 353 aaKnown RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CKMT1AP12532 417 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 EID2Q8N6I1 236 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 OR4M1Q8NGD0 313 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 OR52P1PQ8NH57 321 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 EMID1Q96A84 441 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 RBMXL1Q96E39 390 aaKnown RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 NFYBP25208 207 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CX3CR1P49238 355 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 OR6C4Q8NGE1 309 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 OR10R2Q8NGX6 335 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 NANOS1Q8WY41 292 aaKnown RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 SUSD3Q96L08 255 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ATRNL1Q5VV63 1379 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ALDOBP05062 364 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 FUT4P22083 530 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 SMCO4Q9NRQ5 59 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 PRELID3BQ9Y3B1 194 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ACP5P13686 325 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 RIN1Q13671 783 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 C2orf76Q3KRA6 126 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 OR10Q1Q8NGQ4 319 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CHAC2Q8WUX2 184 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 FEVQ99581 238 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 HS3ST4Q9Y661 456 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 LRRC37A3O60309 1634 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 A6NHS1 94 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 JUPP14923 745 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 NAA10P41227 235 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CSNK2A1P68400 391 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 SLC10A6Q3KNW5 377 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF776Q68DI1 518 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CDCA2Q69YH5 1023 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF611Q8N823 705 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CSNK2A3Q8NEV1 391 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 SH3YL1Q96HL8 342 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-201ENST00000345617 RAB3DO95716 219 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 ENPP6Q6UWR7 440 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 FAM83CQ9BQN1 747 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 RHCGQ9UBD6 479 aa18.41■□□□□ 0.54
HDAC4-201ENST00000345617 CLN5O75503 358 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 LRIT3Q3SXY7 679 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 STEAP4Q687X5 459 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 GALNT10Q86SR1 603 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 FAM46AQ96IP4 442 aaKnown RBP18.4■□□□□ 0.54
HDAC4-201ENST00000345617 WASH6PQ9NQA3 447 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 AIG1Q9NVV5 245 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 PGCP20142 388 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 CDK5R2Q13319 367 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 VRTNQ9H8Y1 702 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SRPX2O60687 465 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SOWAHAQ2M3V2 549 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SLC6A19Q695T7 634 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SSX9Q7RTT3 188 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF597Q96LX8 424 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 DOCK11Q5JSL3 2073 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 TXNL1O43396 289 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 PKLRP30613 574 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 GALK2Q01415 458 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 BDH1Q02338 343 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF546Q86UE3 836 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 KLHDC8BQ8IXV7 354 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 GPR148Q8TDV2 347 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 MITD1Q8WV92 249 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF681Q96N22 645 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 C4AP0C0L4 1744 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 PRAMEF11O60813 436 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms