RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MSL3P1P0C860 447 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 AVPR2P30518 371 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 EPS8Q12929 822 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 SMN1Q16637 294 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 RFX4Q33E94 735 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 MFSD4BQ5TF39 518 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 B3GNT8Q7Z7M8 397 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 KMT5CQ86Y97 462 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 ZNF615Q8N8J6 731 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 C16orf52Q8NHV5 167 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CLIP3Q96DZ5 547 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CNDP2Q96KP4 475 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 CCDC74BQ96LY2 380 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 GPA33Q99795 319 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 SPATA5L1Q9BVQ7 753 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 ZNF304Q9HCX3 659 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PNO1Q9NRX1 252 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 HCN4Q9Y3Q4 1203 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PCDHGA6Q9Y5G7 932 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 ORC6Q9Y5N6 252 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 IGKV3D-11A0A0A0MRZ8 115 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CPSF4LA6NMK7 179 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 XPNPEP2O43895 674 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CT45A8P0DMV1 189 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CT45A9P0DMV2 189 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PTNP21246 168 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 HPCAP84074 193 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 FUT7Q11130 342 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CDK5R2Q13319 367 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 KCTD21Q4G0X4 260 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 LIN52Q52LA3 116 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CT45A2Q5DJT8 189 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 C6orf141Q5SZD1 244 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 TMEM236Q5W0B7 351 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 NIPAL1Q6NVV3 410 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 KLHL17Q6TDP4 642 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 COX15Q7KZN9 410 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 FBLIM1Q8WUP2 373 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 STACQ99469 402 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 GABARAPL3Q9BY60 117 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 MRPS26Q9BYN8 205 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 SAP130Q9H0E3 1048 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 ING2Q9H160 280 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PAPOLBQ9NRJ5 636 aaKnown RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 RASSF1Q9NS23 344 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
CDC42-202ENST00000344548 OCIAD1Q9NX40 245 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 A0A1B0GX78 115 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 DSCR3O14972 297 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 BRINP1O60477 761 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ADAM11O75078 769 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 STX11O75558 287 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 CKMT1AP12532 417 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 CRHBPP24387 322 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 IL5RAQ01344 420 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 RHAGQ02094 409 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 DSG2Q14126 1118 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 DHRS4L2Q6PKH6 230 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 TAGAPQ8N103 731 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ZNF619Q8N2I2 560 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SENP5Q96HI0 755 aaPredicted RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 OR10A5Q9H207 317 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ADNPQ9H2P0 1102 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 AKIRIN1Q9H9L7 192 aaPredicted RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 GMPPBQ9Y5P6 360 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 R4GN57 208 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 C17orf105B2RV13 164 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 KIAA0513O60268 411 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SLITRK5O94991 958 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 AGR2O95994 175 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 HTR1AP08908 422 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ANXA8P13928 327 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 TNNI3P19429 210 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 RPS4Y1P22090 263 aaKnown RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 FMO3P31513 532 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ZNF136P52737 540 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 TPD52P55327 224 aaPredicted RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 POU6F2P78424 691 aaPredicted RBP12.59□□□□□ -0.39
CDC42-202ENST00000344548 DCST1Q5T197 706 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ZCCHC12Q6PEW1 402 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 MORN4Q8NDC4 146 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 CEP76Q8TAP6 659 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 APH1BQ8WW43 257 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 MVB12AQ96EY5 273 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 ITPAQ9BY32 194 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 REV1Q9UBZ9 1251 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SATB2Q9UPW6 733 aa12.59□□□□□ -0.39
CDC42-202ENST00000344548 SYT5O00445 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms