RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 FGF20Q9NP95 211 aaPredicted RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 CPSF4LA6NMK7 179 aaKnown RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 PRR23D1E9PI22 279 aaPredicted RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 KLHL18O94889 574 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 TFP02787 698 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 STATHP02808 62 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 MRPL3P09001 348 aaKnown RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 PRR23D2P0DMB1 279 aaPredicted RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 CXCL2P19875 107 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 GPR4P46093 362 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 SMAD3P84022 425 aaKnown RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 SNTB2Q13425 540 aaKnown RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 MINDY4Q4G0A6 757 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 FAAP20Q6NZ36 180 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 LRRC28Q86X40 367 aaPredicted RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 RPLP0P6Q8NHW5 317 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 SLC22A12Q96S37 553 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
CLCN1-201ENST00000343257 COPS3Q9UNS2 423 aa13.97□□□□□ -0.17
CLCN1-201ENST00000343257 UQCRC2P22695 453 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 TRIM23P36406 574 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 KCNJ5P48544 419 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 VEGFCP49767 419 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 CDKL4Q5MAI5 379 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 RNLSQ5VYX0 342 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 FAM71E1Q6IPT2 247 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 SLC25A25Q6KCM7 469 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 RRM2BQ7LG56 351 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 HDDC2Q7Z4H3 204 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 LINC00518Q8N0U6 118 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 SLC38A2Q96QD8 506 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 BRF2Q9HAW0 419 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 MGAT4CQ9UBM8 478 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 AP1M2Q9Y6Q5 423 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 E9PI62 339 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 G3V3Q6 166 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 RNF13O43567 381 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 HYAL3O43820 417 aaPredicted RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 REM1O75628 298 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 CBX7O95931 251 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 SULT1A3P0DMM9 295 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 SULT1A4P0DMN0 295 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 AHRP35869 848 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 CTSCP53634 463 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 C21orf58P58505 322 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 CNTN1Q12860 1018 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 CEACAM19Q7Z692 300 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 OAFQ86UD1 273 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 BOLLQ8N9W6 283 aaKnown RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 THAP4Q8WY91 577 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 TMEM159Q96B96 161 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 RADILQ96JH8 1075 aa13.96□□□□□ -0.17
CLCN1-201ENST00000343257 LYARQ9NX58 379 aaKnown RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 H2AFY2Q9P0M6 372 aaPredicted RBP13.96□□□□□ -0.17
CLCN1-201ENST00000343257 PRAMEF27A3QJZ7 478 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 HMGN4O00479 90 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 GMDSO60547 372 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 EFCAB14O75071 495 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 ZDHHC11BP0C7U3 371 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 SERPINA4P29622 427 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 TBPL1P62380 186 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 DEFA5Q01523 94 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 ELOAQ14241 798 aaKnown RBP13.95□□□□□ -0.18
CLCN1-201ENST00000343257 SHEQ5VZ18 495 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 SFXN4Q6P4A7 337 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 SLCO4C1Q6ZQN7 724 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 KRT78Q8N1N4 520 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 SHARPINQ9H0F6 387 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 C11orf49Q9H6J7 331 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 WASH6PQ9NQA3 447 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 ADARB2Q9NS39 739 aaKnown RBP13.95□□□□□ -0.18
CLCN1-201ENST00000343257 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 TNFRSF10DQ9UBN6 386 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 B4GALT6Q9UBX8 382 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 A0A087WUU8 490 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 GLTPD2A6NH11 291 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 RGS9O75916 674 aaPredicted RBP13.95□□□□□ -0.18
CLCN1-201ENST00000343257 MPC1LP0DKB6 136 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 PTHLHP12272 177 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 CTAG1AP78358 180 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 DSG2Q14126 1118 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 HBMQ6B0K9 141 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 Q6ZVL8 140 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 CHST9Q7L1S5 443 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 TTLQ8NG68 377 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 YIPF5Q969M3 257 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 WBP1Q96G27 269 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 ZNF578Q96N58 590 aaPredicted RBP13.95□□□□□ -0.18
CLCN1-201ENST00000343257 DMRT3Q9NQL9 472 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 CA10Q9NS85 328 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 POMT2Q9UKY4 750 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 PLAGL1Q9UM63 463 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 ASB4Q9Y574 426 aa13.95□□□□□ -0.18
CLCN1-201ENST00000343257 MFSD2BA6NFX1 497 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms