RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 NUMBP49757 651 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CLCNKBP51801 687 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SORDQ00796 357 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 MBLAC2Q68D91 279 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KCTD18Q6PI47 426 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 DHRS11Q6UWP2 260 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CXorf40AQ8TE69 158 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 PURBQ96QR8 312 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 SIDT1Q9NXL6 827 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 BET1LQ9NYM9 111 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ABRACLQ9P1F3 81 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ERVW-1Q9UQF0 538 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CRB1P82279 1406 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZBTB7AO95365 584 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 MT-ND4P03905 459 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 HOXC6P09630 235 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SERPINA2P20848 420 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 PTNP21246 168 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FCER1GP30273 86 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 PSEN2P49810 448 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ATP4BP51164 291 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 IRF4Q15306 451 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 PDLIM3Q53GG5 364 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 ACTBL2Q562R1 376 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OGFOD3Q6PK18 319 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 BRICD5Q6PL45 260 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ESPNLQ6ZVH7 1005 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CCDC116Q8IYX3 515 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 STEAP2Q8NFT2 490 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR1S2Q8NGQ3 325 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC32A1Q9H598 525 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 DBNDD1Q9H9R9 158 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 HHATLQ9HCP6 504 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SARDHQ9UL12 918 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 LOC285095A0A1B0GVY8 99 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CXCL8P10145 99 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 HOXD10P28358 340 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 RIDAP52758 137 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 PKIAP61925 76 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 RPS14P62263 151 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 KEAP1Q14145 624 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 EBPQ15125 230 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 EXOSC6Q5RKV6 272 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 FAM180BQ6P0A1 224 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 GPR26Q8NDV2 337 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZFAND1Q8TCF1 268 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 YIPF5Q969M3 257 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SDSLQ96GA7 329 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CMKLR1Q99788 373 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 P2RY13Q9BPV8 354 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 COLEC11Q9BWP8 271 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 C20orf85Q9H1P6 137 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR51I1Q9H343 314 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 POFUT1Q9H488 388 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 AGPAT4Q9NRZ5 378 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC22A14Q9Y267 594 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 PRAMEF22A3QJZ6 481 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KLF8O95600 359 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 RAF1P04049 648 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CAPNS1P04632 268 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CTSEP14091 401 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TEKQ02763 1124 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ELAVL2Q12926 359 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 BTNL8Q6UX41 500 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TMEM150AQ86TG1 271 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 VRK3Q8IV63 474 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FAM217AQ8IXS0 508 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FAM213BQ8TBF2 198 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CABLES2Q9BTV7 478 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 C11orf49Q9H6J7 331 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF142P52746 1687 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLC22A23A1A5C7 686 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BLOC1S5-TXNDC5H3BN57 136 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TRIM77I1YAP6 450 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLC2A1P11166 492 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 HOXD13P35453 343 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NSG1P42857 185 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SBK1Q52WX2 424 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZC3H12AQ5D1E8 599 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 SIGIRRQ6IA17 410 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DCLRE1AQ6PJP8 1040 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR51G2Q8NGK0 314 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZFPM2Q8WW38 1151 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TBL1XR1Q9BZK7 514 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ASB7Q9H672 318 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 IL21RQ9HBE5 538 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLAMF7Q9NQ25 335 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SIRPGQ9P1W8 387 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 G3V3Q6 166 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DDOSTP39656 456 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ECI1P42126 302 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZNF239Q16600 458 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 PLAG1Q6DJT9 500 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 LCLAT1Q6UWP7 414 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 APOOLQ6UXV4 268 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 HSD17B11Q8NBQ5 300 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 GPA33Q99795 319 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLC12A9Q9BXP2 914 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms