RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 UBL3O95164 117 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 KLF9Q13886 244 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 OPCMLQ14982 345 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF658BQ4V348 819 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SYTL3Q4VX76 610 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 RGS7BPQ6MZT1 257 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 USP50Q70EL3 339 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 GET4Q7L5D6 327 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SLC9B2Q86UD5 537 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 KLBQ86Z14 1044 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 FTMTQ8N4E7 242 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 DTX3Q8N9I9 347 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 OR6M1Q8NGM8 313 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 OR6T1Q8NGN1 323 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 NR4A3Q92570 626 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 MRPS31Q92665 395 aaKnown RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 FBXW5Q969U6 566 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TMEM159Q96B96 161 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TIFAQ96CG3 184 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SARGQ9BW04 601 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 CPEB1Q9BZB8 566 aaKnown RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 BCL2L10Q9HD36 194 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 RNF181Q9P0P0 153 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 RABL2AQ9UBK7 228 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 ING1Q9UK53 422 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TSPAN6O43657 245 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 FZD7O75084 574 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TGM6O95932 706 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PRKACAP17612 351 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 IFNGR2P38484 337 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PREPP48147 710 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PRLHRP49683 370 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 RAB8AP61006 207 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SNRPD1P62314 119 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 ELAVL2Q12926 359 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SLC22A10Q63ZE4 541 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 HIST2H2AA3Q6FI13 130 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 OR4Q3Q8NH05 313 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 BBS10Q8TAM1 723 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TRMT10AQ8TBZ6 339 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TIMP4Q99727 224 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 LINC00597Q9H2U6 94 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PTGFRNQ9P2B2 879 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PRKAG2Q9UGJ0 569 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 CTDSPLO15194 276 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 ADAM12O43184 909 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PRAF2O60831 178 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 B3GALNT1O75752 331 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SC5DO75845 299 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 C1orf105O95561 183 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 GLULP15104 373 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 F8A1P23610 371 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TRIM23P36406 574 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 OMPP47874 163 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SELENOPP49908 381 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TPMTP51580 245 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 RPS7P62081 194 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 LMAN2Q12907 356 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 BTN1A1Q13410 526 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 GPR162Q16538 588 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SYPL1Q16563 259 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SPDYE7PQ495Y7 208 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SLC8B1Q6J4K2 584 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SLC30A6Q6NXT4 461 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 NXPE4Q6UWF7 544 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 BAIAP2L2Q6UXY1 529 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 CHMP1BQ7LBR1 199 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PXKQ7Z7A4 578 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 OR51Q1Q8NH59 317 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 RPLP0P6Q8NHW5 317 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 FAIM2Q9BWQ8 316 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 TMPRSS13Q9BYE2 586 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 ANKRD19PQ9H560 264 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PRM3Q9NNZ6 103 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 CD84Q9UIB8 345 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 ACSL5Q9ULC5 683 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 KLF2Q9Y5W3 355 aaPredicted RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 MTCL1Q9Y4B5 1905 aaKnown RBP9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PLXND1Q9Y4D7 1925 aa9.06□□□□□ -0.96
HOXA1-201ENST00000343060 PLSCR5A0PG75 271 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SLC9B1P1A6NJY1 282 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 OR2AG2A6NM03 316 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 KLF4O43474 513 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 PEX14O75381 377 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 HPXP02790 462 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SERPIND1P05546 499 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 NMBP08949 121 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 359.8 ms