RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 HNRNPDQ14103 355 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GIMAP1Q8WWP7 306 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 NDFIP1Q9BT67 221 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 HSPE1-MOB4S4R3N1 261 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 SMIM30A4D0T7 59 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 KIAA0513O60268 411 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 SPP1P10451 314 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CBLP22681 906 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 PROZP22891 400 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CD52P31358 61 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 IL22RA1Q8N6P7 574 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 INTS12Q96CB8 462 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 AKAP6Q13023 2319 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GPR39O43194 453 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 KDELR3O43731 214 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ADAMTS4O75173 837 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 UBL4AP11441 157 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ACP5P13686 325 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 PSMB3P49720 205 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ADARB1P78563 741 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CRYZQ08257 329 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 PCBP2Q15366 365 aaKnown RBP eCLIP16.8■□□□□ 0.289e-7■■■■■ 37.6
SMAD4-201ENST00000342988 MAMDC2Q7Z304 686 aaPredicted RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 STEAP2Q8NFT2 490 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ELP4Q96EB1 424 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ABCA1O95477 2261 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 MAKP20794 623 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 HYAL2Q12891 473 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CNTN4Q8IWV2 1026 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CANT1Q8WVQ1 401 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 TMEM59Q9BXS4 323 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 SEMA4CQ9C0C4 833 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 MAGIXQ9H6Y5 334 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 FBXL12Q9NXK8 326 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 SIDT1Q9NXL6 827 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GAR1Q9NY12 217 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CDHR4A6H8M9 788 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 OR10J4P0C629 311 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 KDELR2P33947 212 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GABRA3P34903 492 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GPR50Q13585 617 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 DRAXINQ8NBI3 349 aaPredicted RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 OR6F1Q8NGZ6 308 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ADAMTS19Q8TE59 1207 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 HERPUD2Q9BSE4 406 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 TTTY10Q9BZA0 68 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 HRASLSQ9HDD0 168 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF355PQ9NSJ1 428 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 PCDHGA1Q9Y5H4 931 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 FSCN2O14926 492 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 CT45A10P0DMU9 189 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ARSBP15848 533 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ACVR1BP36896 505 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 FJX1Q86VR8 437 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 TEX26Q8N6G2 289 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 C1orf52Q8N6N3 182 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 OR2T35Q8NGX2 323 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ALG12Q9BV10 488 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 GNB4Q9HAV0 340 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ADH5P11766 374 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 Q8N9G6 341 aaPredicted RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 PKP2Q99959 881 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 PRTFDC1Q9NRG1 225 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 MMP20O60882 483 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 APBB3O95704 486 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 AMTP48728 403 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 MRPL19P49406 292 aaKnown RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 SPHARQ15513 63 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 CCBE1Q6UXH8 406 aaPredicted RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 GTF2H4Q92759 462 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 MCHR1Q99705 422 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 GLO1Q04760 184 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 HACD4Q5VWC8 232 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 GPR155Q7Z3F1 870 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 OR9A1PQ8NGU1 263 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 SUMO1P63165 101 aaKnown RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 ERMP1Q7Z2K6 904 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 OR8J3Q8NGG0 315 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 REEP6Q96HR9 211 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 OR8D2Q9GZM6 311 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 UNC5DQ6UXZ4 953 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 OR4M1Q8NGD0 313 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 DEFB126Q9BYW3 111 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 NT5DC2Q9H857 520 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 TAC3Q9UHF0 121 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 SLC35A2P78381 396 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 TNK1Q13470 666 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 FAM69BQ5VUD6 431 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF776Q68DI1 518 aaPredicted RBP16.79■□□□□ 0.28
SMAD4-201ENST00000342988 DMBX1Q8NFW5 382 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 DPEP3Q9H4B8 488 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 PREBQ9HCU5 417 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 PROS1P07225 676 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 PLCXD2Q0VAA5 305 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 FBXO48Q5FWF7 155 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 OGFOD3Q6PK18 319 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms