RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GATBO75879 557 aaKnown RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ARL6IP5O75915 188 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ADRB3P13945 408 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 PSMB10P40306 273 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 GRK6P43250 576 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 OC90Q02509 493 aaPredicted RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM44Q2T9K0 475 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 TAF8Q7Z7C8 310 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 C7orf61Q8IZ16 206 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 TTLQ8NG68 377 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 OR4K14Q8NGD5 310 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 NRTNQ99748 197 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 SPNS1Q9H2V7 528 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 FBXL3Q9UKT7 428 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ZC3H12DA2A288 527 aaKnown RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF670-ZNF695F2Z2N8 137 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC6A12P48065 614 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 VSX2P58304 361 aaPredicted RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 PSMA6P60900 246 aaKnown RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 PITPNAQ00169 270 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF782Q6ZMW2 699 aaPredicted RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 CALHM3Q86XJ0 350 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 TM9SF4Q92544 642 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 ZSWIM3Q96MP5 696 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 RC3H2Q9HBD1 1191 aaKnown RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 MKL2Q9ULH7 1088 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 NDRG2Q9UN36 371 aaKnown RBP11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.54
SNRNP48-201ENST00000342415 EDDM13A0A1B0GTR0 161 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SOCS6O14544 535 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 KHNYNO15037 678 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 YY2O15391 372 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 AKR7A2O43488 359 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 FZD6O60353 706 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 CRYZL1O95825 349 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 APODP05090 189 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 ZDHHC11BP0C7U3 371 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 AK4P27144 223 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SHC1P29353 583 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 PDGFRLQ15198 375 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 CNKSR3Q6P9H4 555 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 GALNTL5Q7Z4T8 443 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SLITRK4Q8IW52 837 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 ACOT4Q8N9L9 421 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 OR52I1Q8NGK6 324 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 B3GNT4Q9C0J1 378 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 HOXD1Q9GZZ0 328 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC25A18Q9H1K4 315 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LRRN3E7EW58 273 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 GABRPO00591 440 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 HYAL3O43820 417 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 H2AFB2P0C5Z0 115 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 ELAVL3Q14576 367 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 EIPR1Q53HC9 387 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 PGBD2Q6P3X8 592 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 UBE2Q1Q7Z7E8 422 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SYT9Q86SS6 491 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LACC1Q8IV20 430 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 NATD1Q8N6N6 113 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC7A6Q92536 515 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 MKKSQ9NPJ1 570 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 OR6C2Q9NZP2 312 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 MYEF2Q9P2K5 600 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 TRAV27A0A087WT01 109 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 XKRYO14609 159 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 PPP1R3DO95685 299 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 MT-ND4P03905 459 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 GNALP38405 381 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 PRLHRP49683 370 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 AP3S2P59780 193 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LTB4RQ15722 352 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 C18orf63Q68DL7 685 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 TCTN3Q6NUS6 607 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 LSM14AQ8ND56 463 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SETD6Q8TBK2 473 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 C7orf34Q96L11 122 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF582Q96NG8 517 aaPredicted RBP11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 SAMD11Q96NU1 681 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 MGAT4CQ9UBM8 478 aa11.7□□□□□ -0.54
SNRNP48-201ENST00000342415 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 PLPP1O14494 284 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 FABP7O15540 132 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 LDB3O75112 727 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 RAB3BP20337 219 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 EVI2BP34910 448 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms