RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 EEF1E1-BLOC1S5C9J1V9 151 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 XKRYO14609 159 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 MPC1LP0DKB6 136 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 M6PRP20645 277 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 CFL1P23528 166 aaKnown RBP11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 PSMB10P40306 273 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 SPINT3P49223 89 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 VEGFCP49767 419 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 AIMP2Q13155 320 aaKnown RBP11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 OR4N5Q8IXE1 308 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 OR8J2Q8NGG1 315 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 SLC38A5Q8WUX1 472 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 MYLIPQ8WY64 445 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 GLYATL1Q969I3 302 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 RERGQ96A58 199 aaPredicted RBP11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 GPER1Q99527 375 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 COL14A1Q05707 1796 aaKnown RBP11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 AGPAT2O15120 278 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 CNMDO75829 334 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 GABRA5P31644 462 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 GRB14Q14449 540 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 RTP2Q5QGT7 225 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 GPALPP1Q8IXQ4 340 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 PLCXD1Q9NUJ7 323 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 ACER3Q9NUN7 267 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 ASB4Q9Y574 426 aa11.83□□□□□ -0.52
SSX2IP-201ENST00000342203 DRGXA6NNA5 263 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MCIDASD6RGH6 385 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ACP2P11117 423 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ZNF14P17017 642 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PSMA3P25788 255 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 GRK6P43250 576 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 TPMTP51580 245 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 KCNC3Q14003 757 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 BCL2A1Q16548 175 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MLIPQ5VWP3 458 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 HLA-DQA1Q5Y7H0 255 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 CHST14Q8NCH0 376 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 HHATLQ9HCP6 504 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 SCN1AP35498 2009 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PRICKLE3O43900 615 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 LEFTY1O75610 366 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 UCHL1P09936 223 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ARAFP10398 606 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MMP12P39900 470 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 S100A10P60903 97 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 APOOLQ6UXV4 268 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ASB11Q8WXH4 323 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 DCLRE1CQ96SD1 692 aaKnown RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 SEC22CQ9BRL7 303 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 WDR26Q9H7D7 661 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 KLHL9Q9P2J3 617 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MYEF2Q9P2K5 600 aaKnown RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 LGALS8O00214 317 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 SLC25A12O75746 678 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MAT2AP31153 395 aaKnown RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PUM1Q14671 1186 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 UNC5DQ6UXZ4 953 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PTOV1Q86YD1 416 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 GPR135Q8IZ08 494 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 TREX2Q9BQ50 279 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 TLR9Q9NR96 1032 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ITGB4P16144 1822 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 RAF1P04049 648 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 SRCP12931 536 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PDHA2P29803 388 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ILKQ13418 452 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 EIPR1Q53HC9 387 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 NXPE4Q6UWF7 544 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 NUP43Q8NFH3 380 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ZNF416Q9BWM5 594 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 BCL2L14Q9BZR8 327 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 NOX3Q9HBY0 568 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 WASH6PQ9NQA3 447 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 BABAM2Q9NXR7 383 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 KCNK6Q9Y257 313 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 METTL21EPA6NDL7 271 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 PRR35P0CG20 571 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ZNF250P15622 560 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 AQP2P41181 271 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 GBX1Q14549 363 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ESPNLQ6ZVH7 1005 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 SLC7A13Q8TCU3 470 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 ABCG4Q9H172 646 aa11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
SSX2IP-201ENST00000342203 RP1P56715 2156 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 SLC9B1P1A6NJY1 282 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 ELK1P19419 428 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 HTR2AP28223 471 aa11.81□□□□□ -0.52
SSX2IP-201ENST00000342203 HOXA9P31269 272 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms