RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 H6PDO95479 791 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 TNFSF4P23510 183 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 MLC1Q15049 377 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 IQCCQ4KMZ1 466 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 AHSA2Q719I0 299 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ZNF740Q8NDX6 193 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 IL4I1Q96RQ9 567 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 GSTO2Q9H4Y5 243 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 MGAT4BQ9UQ53 548 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 RNASET2O00584 256 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 OR2T1O43869 369 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ANGPTL1O95841 491 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ITIH1P19827 911 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 HSD17B7P56937 341 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 DUSP19Q8WTR2 217 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 PGAM5Q96HS1 289 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 POMT2Q9UKY4 750 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 CLEC4AQ9UMR7 237 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 MYH15Q9Y2K3 1946 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 RGS10O43665 173 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 FMO3P31513 532 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 UCNP55089 124 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 PRODHO43272 600 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 CRYABP02511 175 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 SDC1P18827 310 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 PPP2R2BQ00005 443 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ELAVL1Q15717 326 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 MISPQ8IVT2 679 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 LUZP4Q9P127 313 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 DOCK3Q8IZD9 2030 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 SLITRK5O94991 958 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 DLGAP3O95886 979 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 IFNA6P05013 189 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 SLC35E2P0CK97 266 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 GPR85P60893 370 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 BNIP1Q12981 228 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 ODF4Q2M2E3 257 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 TMEM176BQ3YBM2 270 aaPredicted RBP12.02□□□□□ -0.48
LIN54-201ENST00000340417 C18orf63Q68DL7 685 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 KLHL36Q8N4N3 616 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 AP3S1Q92572 193 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 ATOH8Q96SQ7 321 aa12.02□□□□□ -0.48
LIN54-201ENST00000340417 CCDC163A0A0D9SF12 145 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 HCRTR1O43613 425 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 PPIAP62937 165 aaKnown RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 ELF3P78545 371 aaPredicted RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 GALNT1Q10472 559 aaPredicted RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 LAPTM4BQ86VI4 370 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 OR4D9Q8NGE8 314 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 DHRS1Q96LJ7 313 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 SLC7A11Q9UPY5 501 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 PCDHA9Q9Y5H5 950 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 CEP290O15078 2479 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 ISPDA4D126 451 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 SLC30A4O14863 429 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 ZGLP1P0C6A0 271 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 DRD3P35462 400 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 RPS26P11Q5JNZ5 115 aaPredicted RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 CCNJQ5T5M9 372 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 ERI1Q8IV48 349 aaKnown RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 C1orf216Q8TAB5 229 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 MVB12AQ96EY5 273 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 TRAPPC9Q96Q05 1148 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 CD248Q9HCU0 757 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 GNG8Q9UK08 70 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 H0YIG0 161 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 OR12D2P58182 307 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 FAM111BQ6SJ93 734 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 KBTBD8Q8NFY9 601 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 OR8S1Q8NH09 359 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 OR52A5Q9H2C5 316 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 H0YIV9 168 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 PPM1DO15297 605 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 NPPBP16860 134 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 CSNK1A1P48729 337 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 KCTD18Q6PI47 426 aaPredicted RBP12.02□□□□□ -0.49
LIN54-201ENST00000340417 SLC41A3Q96GZ6 507 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 BIRC8Q96P09 236 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 FOLH1BQ9HBA9 442 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 BTNL2Q9UIR0 455 aa12.02□□□□□ -0.49
LIN54-201ENST00000340417 IGHV1OR21-1A0A087WYE8 117 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 G3V2L1 256 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms