RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 FCN2Q15485 313 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ZDHHC20Q5W0Z9 365 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SMARCD3Q6STE5 483 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 FAM129CQ86XR2 697 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SIRT6Q8N6T7 355 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 BEST4Q8NFU0 473 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SEMA4GQ9NTN9 838 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ACAD8Q9UKU7 415 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 AP1M2Q9Y6Q5 423 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 CIB4A0PJX0 185 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 PGRMC2O15173 223 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 OR1F1O43749 312 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 FGBP02675 491 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 RB1P06400 928 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 C8AP07357 584 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 CFL1P23528 166 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 AP2S1P53680 142 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 PCBP4P57723 403 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SNRPNP63162 240 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SLC7A9P82251 487 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 EFNB1P98172 346 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 FZD5Q13467 585 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 TEAD2Q15562 447 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 FCRLBQ6BAA4 426 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 TMEM91Q6ZNR0 172 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ESPNLQ6ZVH7 1005 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 UBE3DQ7Z6J8 389 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 CCDC116Q8IYX3 515 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 OR51G2Q8NGK0 314 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 TMEM163Q8TC26 289 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 OR5P2Q8WZ92 322 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 KAT2AQ92830 837 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SLC35G5Q96KT7 338 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 SECISBP2Q96T21 854 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ARHGAP9Q9BRR9 750 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 TMEM43Q9BTV4 400 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 IL36AQ9UHA7 158 aa11.22□□□□□ -0.61
CCDC144CP-201ENST00000340196 PLXNA2O75051 1894 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 A0A0A6YYJ9 748 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 OR5K3A6NET4 321 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 INMT-MINDY4F8WBC2 141 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 PRODHO43272 600 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 NARSO43776 548 aaKnown RBP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 FGF18O76093 207 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 LGI1O95970 557 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 LRG1P02750 347 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 HMGN2P05204 90 aaKnown RBP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 TRAPPC2P0DI81 140 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 TRAPPC2BP0DI82 140 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 ERP29P30040 261 aaKnown RBP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 SSTR2P30874 369 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 AHRP35869 848 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 ATP6V1E1P36543 226 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 GPR1P46091 355 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 EVX1P49640 407 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 NCBP2P52298 156 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 DCDC1P59894 354 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 RRAS2P62070 204 aaPredicted RBP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 TMEM107Q6UX40 140 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 HSDL2Q6YN16 418 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 KRT74Q7RTS7 529 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 C12orf40Q86WS4 652 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 TCTE3Q8IZS6 198 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 ING5Q8WYH8 240 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 ZNF607Q96SK3 696 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 DDX31Q9H8H2 851 aaKnown RBP11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 SYNPO2LQ9H987 977 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 INSL6Q9Y581 213 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 CHD9Q3L8U1 2897 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.61
CCDC144CP-201ENST00000340196 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 DOCK9Q9BZ29 2069 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 A0A1W2PRQ8 180 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 UBXN7O94888 489 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 EIF4EP06730 217 aaKnown RBP11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 ACP5P13686 325 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 CXCL3P19876 107 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 GABRA5P31644 462 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 SMSP52788 366 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 TAS2R41P59536 307 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 TPBGQ13641 420 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 GPR176Q14439 515 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 C3orf38Q5JPI3 329 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC27A4Q6P1M0 643 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 RPTNQ6XPR3 784 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 ARIH2OSQ8N7S6 290 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 ZNF485Q8NCK3 441 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 OR11H4Q8NGC9 324 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 IRF7Q92985 503 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 WDR34Q96EX3 536 aa11.21□□□□□ -0.62
CCDC144CP-201ENST00000340196 ZSWIM3Q96MP5 696 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms