RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SLC30A6Q6NXT4 461 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 CDC73Q6P1J9 531 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 GHDCQ8N2G8 530 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 FAM109AQ8N4B1 249 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 CHMP6Q96FZ7 201 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 CCDC115Q96NT0 180 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 ZDHHC11Q9H8X9 412 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 FLRT3Q9NZU0 649 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 BTNL2Q9UIR0 455 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 DIDO1Q9BTC0 2240 aaKnown RBP13.96□□□□□ -0.18
UBE3B-201ENST00000340074 RNF103-CHMP3A0A140T963 221 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 GNB5O14775 395 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 IL6P05231 212 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 CELA3AP09093 270 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
UBE3B-201ENST00000340074 POLR2JP52435 117 aaKnown RBP13.95□□□□□ -0.18
UBE3B-201ENST00000340074 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE3B-201ENST00000340074 BHLHB9Q6PI77 547 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 FIGNL1Q6PIW4 674 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 ANGPTL8Q6UXH0 198 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 GALNT10Q86SR1 603 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 COX18Q8N8Q8 333 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 CDS1Q92903 461 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 TMEM41AQ96HV5 264 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 GNRHR2Q96P88 292 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 PANX1Q96RD7 426 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 STACQ99469 402 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 INPP5KQ9BT40 448 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 ZNF703Q9H7S9 590 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-201ENST00000340074 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
UBE3B-201ENST00000340074 FAF1Q9UNN5 650 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-201ENST00000340074 A0A0G2JND7 137 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 KCNK2O95069 426 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 VIMP08670 466 aaKnown RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 MATN1P21941 496 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 UQCRC2P22695 453 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 EVI2BP34910 448 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 CDKN2CP42773 168 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 MAN2A2P49641 1150 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 PSMD4P55036 377 aaKnown RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 STX1BP61266 288 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 RPS26P62854 115 aaKnown RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 RBPJQ06330 500 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 SLC10A1Q14973 349 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 CCNJQ5T5M9 372 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 CHERPQ8IWX8 916 aaKnown RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 OR5D16Q8NGK9 328 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 GOT1L1Q8NHS2 421 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-201ENST00000340074 FAM110BQ8TC76 370 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 ADAMTS15Q8TE58 950 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 RNF138Q8WVD3 245 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 STON2Q8WXE9 905 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 OR7D2Q96RA2 312 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 SIKE1Q9BRV8 207 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 BTBD2Q9BX70 525 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 PIGUQ9H490 435 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 SERHL2Q9H4I8 314 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 DUSP22Q9NRW4 184 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 FBXO34Q9NWN3 711 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 GIN1Q9NXP7 522 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 KCNE3Q9Y6H6 103 aa13.94□□□□□ -0.18
UBE3B-201ENST00000340074 A0A1B0GTH9 108 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 FAM234BA2RU67 622 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 DYNC1I1O14576 645 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 FADS1O60427 444 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SLC19A2O60779 497 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SEMA7AO75326 666 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 KRT16P08779 473 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 STSP08842 583 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 GDF1P27539 372 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 GAS1P54826 345 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 CASP9P55211 416 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 POU6F2P78424 691 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-201ENST00000340074 LRRC74AQ0VAA2 488 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 GRAMD1BQ3KR37 738 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 TIGD3Q6B0B8 471 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 FGD2Q7Z6J4 655 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 ZAR1Q86SH2 424 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 OR1J4Q8NGS1 313 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SLC35A5Q9BS91 424 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 SERHLQ9NQF3 203 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 ZNF835Q9Y2P0 537 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 HRH3Q9Y5N1 445 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 PHF3Q92576 2039 aaKnown RBP13.93□□□□□ -0.18
UBE3B-201ENST00000340074 MED12Q93074 2177 aa13.93□□□□□ -0.18
UBE3B-201ENST00000340074 CLEC18AA5D8T8 446 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms