RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 OPN5Q6U736 354 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 LRRC74BQ6ZQY2 392 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 IFNEQ86WN2 208 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 RNF148Q8N7C7 305 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 ANKFN1Q8N957 763 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 HIPK4Q8NE63 616 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 NFKBIDQ8NI38 313 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 MCUR1Q96AQ8 359 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 OMA1Q96E52 524 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 TMEM19Q96HH6 336 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 LMF1Q96S06 567 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF350Q9GZX5 532 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 BCL2L10Q9HD36 194 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 GPR83Q9NYM4 423 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 GMPR2Q9P2T1 348 aaKnown RBP16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 PACSIN3Q9UKS6 424 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 USP22Q9UPT9 525 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 C5orf58C9J3I9 102 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 STX11O75558 287 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 PPM1BO75688 479 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 IGKV1D-16P01601 117 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 CHRM4P08173 479 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 FBXO45P0C2W1 286 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 KRT20P35900 424 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 TMED10P49755 219 aaKnown RBP16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 CCL11P51671 97 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 CRISP3P54108 245 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 PNLIPRP2P54317 469 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 HPCAP84074 193 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 GPAT3Q53EU6 434 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 CCNJQ5T5M9 372 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 ABHD17BQ5VST6 288 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 AGAP7PQ5VUJ5 663 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 REEP3Q6NUK4 255 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 FIGNL1Q6PIW4 674 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 GPALPP1Q8IXQ4 340 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 DND1Q8IYX4 353 aaKnown RBP16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 FBXW8Q8N3Y1 598 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 DIO2Q92813 273 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 PMM1Q92871 262 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 AGAP4Q96P64 663 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 SAP130Q9H0E3 1048 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 ABI3Q9P2A4 366 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 ANGPT4Q9Y264 503 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 TPRP12270 2363 aaKnown RBP16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 FREM2Q5SZK8 3169 aa16.48■□□□□ 0.23
SDCBP2-201ENST00000339987 OR6C70A6NIJ9 312 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 A6NL46 340 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ABCB7O75027 752 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 REM1O75628 298 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 PDE5AO76074 875 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 H6PDO95479 791 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ATP6V1C1P21283 382 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ME2P23368 584 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 IL12BP29460 328 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 BNIP2Q12982 314 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 INTS11Q5TA45 600 aaKnown RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 BORAQ6PGQ7 559 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ISLR2Q6UXK2 745 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 FRRS1Q6ZNA5 592 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 PRR22Q8IZ63 422 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 BBS10Q8TAM1 723 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ASB15Q8WXK1 588 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 CLPTM1LQ96KA5 538 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 CNTNAP3BQ96NU0 1288 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 TREX2Q9BQ50 279 aaPredicted RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 CNTNAP3Q9BZ76 1288 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC38A1Q9H2H9 487 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF552Q9H707 407 aaPredicted RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 RUBCNLQ9H714 662 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 FBXO34Q9NWN3 711 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 STMN3Q9NZ72 180 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 SUCOQ9UBS9 1254 aaKnown RBP16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 WDR45Q9Y484 360 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 DSPPQ9NZW4 1301 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 CPAMD8Q8IZJ3 1885 aa16.47■□□□□ 0.23
SDCBP2-201ENST00000339987 A0A0G2JPF8 293 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 HNRNPCL2B2RXH8 293 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 HNRNPCL3B7ZW38 293 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 KIAA0513O60268 411 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 PGM3O95394 542 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 ZIC2O95409 532 aaPredicted RBP16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 HNRNPCL4P0DMR1 293 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 SOX3P41225 446 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 PCBP3P57721 371 aaKnown RBP16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 CXADRP78310 365 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 MFAP5Q13361 173 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 EFR3AQ14156 821 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 NTRK2Q16620 822 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF791Q3KP31 576 aaPredicted RBP16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 TYW3Q6IPR3 259 aaKnown RBP16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 CCDC80Q76M96 950 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 ULK2Q8IYT8 1036 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 BEST3Q8N1M1 668 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 FDCSPQ8NFU4 85 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 OIT3Q8WWZ8 545 aa16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 EFHD2Q96C19 240 aaPredicted RBP16.46■□□□□ 0.23
SDCBP2-201ENST00000339987 COL21A1Q96P44 957 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms