RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 UBQLNLQ8IYU4 475 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 CCDC116Q8IYX3 515 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 SAMD14Q8IZD0 417 aaPredicted RBP14.12□□□□□ -0.15
LINC01116-202ENST00000339037 CIARTQ8N365 385 aaPredicted RBP14.12□□□□□ -0.15
LINC01116-202ENST00000339037 OR9A2Q8NGT5 310 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF483Q8TF39 744 aaPredicted RBP14.12□□□□□ -0.15
LINC01116-202ENST00000339037 KAT2AQ92830 837 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 PIK3IP1Q96FE7 263 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 Q96MF0 132 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 UBTD1Q9HAC8 227 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 HEY2Q9UBP5 337 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 NFU1Q9UMS0 254 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 FBN1P35555 2871 aaKnown RBP14.12□□□□□ -0.15
LINC01116-202ENST00000339037 MXRA5Q9NR99 2828 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 B4DXG7 233 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 NME6O75414 186 aaPredicted RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 IL3P08700 152 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 SNRPAP09012 282 aaKnown RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 PEPDP12955 493 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 CRYGSP22914 178 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 CCKARP32238 428 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 UGT2B10P36537 528 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 KCNJ5P48544 419 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 DSCR4P56555 118 aaPredicted RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 B3GALT5-AS1P59052 145 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 MRPS22P82650 360 aaKnown RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 ACKR1Q16570 336 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 RAET1LQ5VY80 246 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 PRSS57Q6UWY2 283 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 BTLAQ7Z6A9 289 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 MEIOBQ8N635 442 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 RNF138Q8WVD3 245 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 EXOSC8Q96B26 276 aaKnown RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 EFHD2Q96C19 240 aaPredicted RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 PGM2Q96G03 612 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 SLC39A3Q9BRY0 314 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 C1QTNF3Q9BXJ4 246 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 OPN3Q9H1Y3 402 aaPredicted RBP14.11□□□□□ -0.15
LINC01116-202ENST00000339037 GIMAP4Q9NUV9 329 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 SENP1Q9P0U3 644 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 PPP4R1LQ9P1A2 415 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 TRPS1Q9UHF7 1281 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 MCM8Q9UJA3 840 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF225Q9UK10 706 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 OR10H1Q9Y4A9 318 aa14.11□□□□□ -0.15
LINC01116-202ENST00000339037 GNG14A0A1W2PPG7 69 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 SMAD7O15105 426 aaKnown RBP14.1□□□□□ -0.15
LINC01116-202ENST00000339037 HSD3B1P14060 373 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 POU2F1P14859 743 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 HSD3B2P26439 372 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 EVI2BP34910 448 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 KIR2DL2P43627 348 aaPredicted RBP14.1□□□□□ -0.15
LINC01116-202ENST00000339037 PNLIPRP2P54317 469 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 GAS1P54826 345 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 SIRPAP78324 504 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF474Q6S9Z5 364 aaPredicted RBP14.1□□□□□ -0.15
LINC01116-202ENST00000339037 C20orf204Q6ZNR8 217 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 YTHDF3Q7Z739 585 aaKnown RBP14.1□□□□□ -0.15
LINC01116-202ENST00000339037 SLC44A2Q8IWA5 706 aaPredicted RBP14.1□□□□□ -0.15
LINC01116-202ENST00000339037 CDYL2Q8N8U2 506 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 FIG4Q92562 907 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 MTBPQ96DY7 904 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 PERPQ96FX8 193 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 BDH2Q9BUT1 245 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 FOLH1BQ9HBA9 442 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 ELOVL5Q9NYP7 299 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 TAS2R9Q9NYW1 312 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 TMEM216Q9P0N5 145 aa14.1□□□□□ -0.15
LINC01116-202ENST00000339037 C16orf97H3BN30 126 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 EMC8O43402 210 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 SCO2O43819 266 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 PCDH7O60245 1069 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 PLOD3O60568 738 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 OR4F21O95013 312 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 KRT6AP02538 564 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 KRT6BP04259 564 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 ABHD2P08910 425 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 PCSK6P29122 969 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 KRT6CP48668 564 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 EEFSECP57772 596 aaKnown RBP14.09□□□□□ -0.15
LINC01116-202ENST00000339037 CSTF3Q12996 717 aaKnown RBP14.09□□□□□ -0.15
LINC01116-202ENST00000339037 FGFBP1Q14512 234 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 HEPACAMQ14CZ8 416 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 TCHHL1Q5QJ38 904 aaPredicted RBP14.09□□□□□ -0.15
LINC01116-202ENST00000339037 TEX35Q5T0J7 233 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF550Q7Z398 422 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 FADS6Q8N9I5 356 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 OR4N2Q8NGD1 307 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 FNDC9Q8TBE3 224 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF845Q96IR2 970 aaPredicted RBP14.09□□□□□ -0.15
LINC01116-202ENST00000339037 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
LINC01116-202ENST00000339037 SONP18583 2426 aaKnown RBP14.09□□□□□ -0.15
LINC01116-202ENST00000339037 TRIM64A6NGJ6 449 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 TRIM64BA6NI03 449 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 H0YC42 278 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 MANBAO00462 879 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 SEC14L5O43304 696 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 RIPK2O43353 540 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms