RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 C18orf63Q68DL7 685 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 FTMTQ8N4E7 242 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 TRMT10AQ8TBZ6 339 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 OTUB2Q96DC9 234 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 FUZQ9BT04 418 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 DPAGT1Q9H3H5 408 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 MYNNQ9NPC7 610 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ANKRD36A6QL64 1941 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CHD5Q8TDI0 1954 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ANKRD61A6NGH8 418 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 RASGRP1O95267 797 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SOX2P48431 317 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 KCNJ5P48544 419 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GPR176Q14439 515 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 LYPD4Q6UWN0 246 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GPR135Q8IZ08 494 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 OR56A3Q8NH54 315 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GINS4Q9BRT9 223 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 FCMRO60667 390 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 OR7A10O76100 309 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 C6P13671 934 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ST3GAL3Q11203 375 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TP53I3Q53FA7 332 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 CDKL4Q5MAI5 379 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 COMMD7Q86VX2 200 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM255BQ8WV15 326 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 TM4SF18Q96CE8 201 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GPR174Q9BXC1 333 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GON7Q9BXV9 100 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 GLIPR2Q9H4G4 154 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF69Q9UC07 566 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 UNC80Q8N2C7 3258 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 XIRP2A4UGR9 3374 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 RGS13O14921 159 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 HCN1O60741 890 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SEMG1P04279 462 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ACP2P11117 423 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 CERS1P27544 350 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 HOXD10P28358 340 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 KHKP50053 298 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SIM1P81133 766 aaPredicted RBP13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.28
PCDH8-201ENST00000338862 FAM83HQ6ZRV2 1179 aaPredicted RBP13.29□□□□□ -0.28
PCDH8-201ENST00000338862 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
PCDH8-201ENST00000338862 OVCA2Q8WZ82 227 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ALG8Q9BVK2 526 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 BTBD1Q9H0C5 482 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 RNF208Q9H0X6 261 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 NARFLQ9H6Q4 476 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 SLC7A7Q9UM01 511 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 CHST2Q9Y4C5 530 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 HCFC2Q9Y5Z7 792 aa13.29□□□□□ -0.28
PCDH8-201ENST00000338862 ANTXRLA6NF34 631 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM229AB2RXF0 380 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SLC31A1O15431 190 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 LANCL1O43813 399 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 PTHLHP12272 177 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 PSMB10P40306 273 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SNTB2Q13425 540 aaKnown RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 TRAM2Q15035 370 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 HES5Q5TA89 166 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 FAAP20Q6NZ36 180 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ACBD7Q8N6N7 88 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SUSD6Q92537 303 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 PDXPQ96GD0 296 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 HYLS1Q96M11 299 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SLC25A18Q9H1K4 315 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 PAK6Q9NQU5 681 aaPredicted RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 DIMT1Q9UNQ2 313 aaKnown RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 A0A0A6YYJ9 748 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ANXA3P12429 323 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF250P15622 560 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 AKR1D1P51857 326 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 KANSL1Q7Z3B3 1105 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 NUP43Q8NFH3 380 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM163Q8TC26 289 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ZFAND1Q8TCF1 268 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 KLHL31Q9H511 634 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 ATP13A2Q9NQ11 1180 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SPHK2Q9NRA0 654 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 REV1Q9UBZ9 1251 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 CASP8AP2Q9UKL3 1982 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 TRAV27A0A087WT01 109 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SCO2O43819 266 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms