RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SPRTNQ9H040 489 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 A0A087WUU8 490 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 IGHV5-51A0A0C4DH38 117 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CD38P28907 300 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 OR1D4P47884 311 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TRA2BP62995 288 aaKnown RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CSTF1Q05048 431 aaKnown RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CCBE1Q6UXH8 406 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 MCATQ8IVS2 390 aaKnown RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 DNAJC22Q8N4W6 341 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 OR56A1Q8NGH5 318 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 LMF1Q96S06 567 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 ZBTB20Q9HC78 741 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 POT1Q9NUX5 634 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SLC9A8Q9Y2E8 581 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SLC22A7Q9Y694 548 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TLR4O00206 839 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 PDE9AO76083 593 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 PRKACBP22694 351 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF155Q12901 538 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 FZD5Q13467 585 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 FAM214AQ32MH5 1076 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 DESI1Q6ICB0 168 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF730Q6ZMV8 503 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 CA13Q8N1Q1 262 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 MMABQ96EY8 250 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 ACTRT3Q9BYD9 372 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 OR51E2Q9H255 320 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 SYNDIG1Q9H7V2 258 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 REV1Q9UBZ9 1251 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 FTSJ1Q9UET6 329 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 PRKYO43930 277 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 LGI1O95970 557 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 THY1P04216 161 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 GADD45AP24522 165 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 OR1D5P58170 312 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 TOP3AQ13472 1001 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 GINS1Q14691 196 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 CTF1Q16619 201 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 SLC30A6Q6NXT4 461 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 FRRS1Q6ZNA5 592 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 GATAD2AQ86YP4 633 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF655Q8N720 491 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 COX18Q8N8Q8 333 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 OR52R1Q8NGF1 315 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 TBC1D15Q8TC07 691 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 PITX2Q99697 317 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 MCHR1Q99705 422 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 SMAD5Q99717 465 aaKnown RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 CHCHD6Q9BRQ6 235 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 LYARQ9NX58 379 aaKnown RBP11.74□□□□□ -0.53
LIMK1-201ENST00000336180 MAT2BQ9NZL9 334 aa11.74□□□□□ -0.53
LIMK1-201ENST00000336180 TBX19O60806 448 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 TMCC2O75069 709 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLC2A10O95528 541 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 HOXC4P09017 264 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 DBTP11182 482 aaKnown RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 CDC42P60953 191 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 IL18R1Q13478 541 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SMARCD3Q6STE5 483 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 KIF18BQ86Y91 864 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 WDR36Q8NI36 951 aaKnown RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 PSMA8Q8TAA3 256 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ASB12Q8WXK4 309 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 CNTRLQ7Z7A1 2325 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ZC3H12DA2A288 527 aaKnown RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 FAM183AA6NL82 134 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 C17orf51A8MQB3 221 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 GALR3O60755 368 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 IFNA16P05015 189 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SOX3P41225 446 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF267Q14586 743 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLC35F1Q5T1Q4 408 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLCO6A1Q86UG4 719 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLC15A4Q8N697 577 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SMAP2Q8WU79 429 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SPACA7Q96KW9 195 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 PTCHD1Q96NR3 888 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 PSORS1C1Q9UIG5 152 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLC7A7Q9UM01 511 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 NCOR1O75376 2440 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 M0R082 166 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 CYR61O00622 381 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms