RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 MSS51Q4VC12 460 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 CATSPERGQ6ZRH7 1159 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 LYSMD3Q7Z3D4 306 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TEX19Q8NA77 164 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 GPR26Q8NDV2 337 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR6C4Q8NGE1 309 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR52N2Q8NGI0 321 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 PAQR8Q8TEZ7 354 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D20Q96BZ9 403 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OCSTAMPQ9BR26 566 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 WDR45Q9Y484 360 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DNMT3AQ9Y6K1 912 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 A0A1B0GVT2 93 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MSI1O43347 362 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 CSF3P09919 207 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 JUNBP17275 347 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 POU3F3P20264 500 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ALAS2P22557 587 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TRA2BP62995 288 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 FKBP1BP68106 108 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 INCA1Q0VD86 236 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 PAQR3Q6TCH7 311 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF546Q86UE3 836 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 IFNLR1Q8IU57 520 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR10K1Q8NGX5 313 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 LRRN4Q8WUT4 740 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TXLNGYQ9BZA5 131 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 VAPAQ9P0L0 249 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 POLHQ9Y253 713 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF587BE7ETH6 402 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 BLOC1S5-TXNDC5H3BN57 136 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 GPRIN2O60269 458 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 PIRTP0C851 137 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DHRS4L1P0CG22 281 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SPP1P10451 314 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DTYMKP23919 212 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MINDY4Q4G0A6 757 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ABLIM2Q6H8Q1 611 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF585AQ6P3V2 769 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NHLRC2Q8NBF2 726 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR1M1Q8NGA1 313 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 FGGYQ96C11 551 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 RAB3CQ96E17 227 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 VPS25Q9BRG1 176 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MCCC2Q9HCC0 563 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 K7EQM0 130 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 INHBCP55103 352 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 C2orf76Q3KRA6 126 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF620Q6ZNG0 422 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TREML1Q86YW5 311 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF366Q8N895 744 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MARC2Q969Z3 335 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NMNAT2Q9BZQ4 307 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR2S2Q9NQN1 319 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DCAF13Q9NV06 445 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SALL4Q9UJQ4 1053 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 GPR89AB7ZAQ6 455 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ERI3O43414 337 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 GPR89BP0CG08 455 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 AGXTP21549 392 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NKX2-5P52952 324 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 C5orf46Q6UWT4 87 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NPAS4Q8IUM7 802 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 OR5AK3PQ8NH89 298 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DAZAP1Q96EP5 407 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MCHR1Q99705 422 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ALG8Q9BVK2 526 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZDHHC5Q9C0B5 715 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 C20orf85Q9H1P6 137 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 C11orf49Q9H6J7 331 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MAN2C1Q9NTJ4 1040 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 DMAC2Q9NW81 257 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD36CQ5JPF3 1778 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SMIM28A0A1B0GU29 152 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NPIPA2E9PIF3 369 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NPIPA3F8WFD2 350 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SNRNP70P08621 437 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF16P17020 682 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SPI1P17947 270 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 SHMT2P34897 504 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 YIF1BQ5BJH7 314 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NOXRED1Q6NXP6 359 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM220Q6QAJ8 160 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF705AQ6ZN79 300 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 KDF1Q8NAX2 398 aaPredicted RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ZBTB8AQ96BR9 441 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 NUDT9Q9BW91 350 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 TM6SF2Q9BZW4 377 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 MMP28Q9H239 520 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD19PQ9H560 264 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 PELI2Q9HAT8 420 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 GMPR2Q9P2T1 348 aaKnown RBP5.25□□□□□ -1.57
PTPRB-202ENST00000334414 B4GALT7Q9UBV7 327 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 PCDHA9Q9Y5H5 950 aa5.25□□□□□ -1.57
PTPRB-202ENST00000334414 ARPC1BO15143 372 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SLC6A8P48029 635 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PCBP2Q15366 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PAN2Q504Q3 1202 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms