RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HDHD5Q9BXW7 423 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
HDAC6-201ENST00000334136 HCN2Q9UL51 889 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 FAM186AA6NE01 2351 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-201ENST00000334136 DAPL1A0PJW8 107 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 OR5K3A6NET4 321 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GLOD5A6NK44 160 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 FLRT2O43155 660 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 RETP07949 1114 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GLB1P16278 677 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF24P17028 368 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 NUP62P37198 522 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-201ENST00000334136 MAGEA12P43365 314 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 SLAMF1Q13291 335 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GINS1Q14691 196 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 RUNDC3AQ59EK9 446 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 LIN54Q6MZP7 749 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 LINGO2Q7L985 606 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 NRARPQ7Z6K4 114 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 METTL4Q8N3J2 472 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 OR8K5Q8NH50 307 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 RELTQ969Z4 430 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GPR78Q96P69 363 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 TTTY10Q9BZA0 68 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 TUBB1Q9H4B7 451 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 TMPRSS11EQ9UL52 423 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 UGT2A1Q9Y4X1 527 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 A0A1W2PQL4 384 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 C4orf47A7E2U8 309 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 HRO43593 1189 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SIGLEC6O43699 453 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SEC14L2O76054 403 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 MYF5P13349 255 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 RNH1P13489 461 aaKnown RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 GMFBP60983 142 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 E2F1Q01094 437 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CBLBQ13191 982 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 KHDRBS2Q5VWX1 349 aaKnown RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TMEM105Q8N8V8 129 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 OR56A3Q8NH54 315 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SNX33Q8WV41 574 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CD180Q99467 661 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 RACGAP1Q9H0H5 632 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 ADAP2Q9NPF8 381 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 LYARQ9NX58 379 aaKnown RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 COPS7AQ9UBW8 275 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 UTS2RQ9UKP6 389 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TPRP12270 2363 aaKnown RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 AGAP14A8MT82 685 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 EPHA8P29322 1005 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 OMPP47874 163 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CDH11P55287 796 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 PRR5P85299 388 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 RHAGQ02094 409 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 AGERQ15109 404 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 AGAP6Q5VW22 663 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 WASH2PQ6VEQ5 465 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CELF2-AS1Q8N7Q2 184 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 MUL1Q969V5 352 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TCTN2Q96GX1 697 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 AGAP4Q96P64 663 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 MACROD1Q9BQ69 325 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 PISDQ9UG56 409 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 A0A1W2PRG6 482 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TLCD2A6NGC4 264 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SPINT1O43278 529 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 HBQ1P09105 142 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 FBLP22087 321 aaKnown RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 TIA1P31483 386 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 NCBP2P52298 156 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CD300CQ08708 224 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SLC35F1Q5T1Q4 408 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 Q6ZSR9 355 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SHFQ7M4L6 423 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF367Q7RTV3 350 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 OR2T11Q8NH01 316 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 GPBAR1Q8TDU6 330 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 SLC35G5Q96KT7 338 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 PTCHD1Q96NR3 888 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 ENAMQ9NRM1 1142 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 STARD5Q9NSY2 213 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 ATXN7L1Q9ULK2 861 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-201ENST00000334136 CSNK1G3Q9Y6M4 447 aa11.1□□□□□ -0.63
HDAC6-201ENST00000334136 E2F3O00716 465 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 GNB5O14775 395 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 CDC123O75794 336 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms