RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SHEQ5VZ18 495 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 CILP2Q8IUL8 1156 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 CCDC74AQ96AQ1 378 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 NSUN3Q9H649 340 aaKnown RBP15.6■□□□□ 0.09
PTCH1-201ENST00000331920 LOC102724200A0A096LPH7 203 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-201ENST00000331920 KIAA0355O15063 1070 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 NKX3-2P78367 333 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 CYCSP99999 105 aaKnown RBP15.6■□□□□ 0.09
PTCH1-201ENST00000331920 TAF9Q16594 264 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 S100A7AQ86SG5 101 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 TMEM104Q8NE00 496 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 NR4A3Q92570 626 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SPIN2AQ99865 258 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SPIN2BQ9BPZ2 258 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 CACNG6Q9BXT2 260 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SULT1C2O00338 296 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 AKR1C1Q04828 323 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 MAP4K2Q12851 820 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 RAB41Q5JT25 222 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 LRRC25Q8N386 305 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-201ENST00000331920 MUS81Q96NY9 551 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 FOXN4Q96NZ1 517 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SPATA31A6Q5VVP1 1343 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 PRSS51A0A1B0GVH4 220 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 ITGB5P18084 799 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 HES1Q14469 280 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 FAM58AQ8N1B3 248 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 MYOTQ9UBF9 498 aa15.6■□□□□ 0.09
PTCH1-201ENST00000331920 FBXO24O75426 580 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 FAM163BP0C2L3 166 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 PRKACBP22694 351 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 S100A7P31151 101 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TDGQ13569 410 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 LPAL2Q16609 132 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 FAM214AQ32MH5 1076 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 DACT2Q5SW24 774 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TEPSINQ96N21 525 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TSGA13Q96PP4 275 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 AK6Q9Y3D8 172 aaKnown RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 NPIPA5A0A0B4J1W7 369 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 KLF8O95600 359 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 OPN1LWP04000 364 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF44P15621 663 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 GSK3AP49840 483 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 IL13RA1P78552 427 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SMAD2Q15796 467 aaKnown RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 ARHGAP11AQ6P4F7 1023 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 VWA5B2Q8N398 1253 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SNAPC3Q92966 411 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TULP4Q9NRJ4 1543 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF28P17035 718 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 RPL7P18124 248 aaKnown RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 DUSP28Q4G0W2 176 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 KBTBD6Q86V97 674 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 GPR174Q9BXC1 333 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SLC6A5Q9Y345 797 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 KDM4FA0A1W2PPD8 638 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 HOXB5P09067 269 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 ADGRF1Q5T601 910 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 MMP28Q9H239 520 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 GLTPQ9NZD2 209 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 FADS1O60427 444 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 PEX10O60683 326 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 OXSR1O95747 527 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 UBE2KP61086 200 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 PRR22Q8IZ63 422 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 C2CD4BA6NLJ0 364 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 EFCAB7A8K855 629 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 IRAK2O43187 625 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TGM5O43548 720 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 UGT2B7P16662 529 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 CCBE1Q6UXH8 406 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SULF2Q8IWU5 870 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SYNPRQ8TBG9 265 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 SGK3Q96BR1 496 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 TBC1D20Q96BZ9 403 aa15.59■□□□□ 0.09
PTCH1-201ENST00000331920 FAAHO00519 579 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 KDELR2P33947 212 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 C9orf135Q5VTT2 229 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 OR9A2Q8NGT5 310 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 ACDQ96AP0 544 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 NMNAT2Q9BZQ4 307 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 SLC25A18Q9H1K4 315 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 FAM198AQ9UFP1 575 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 CAMK2AQ9UQM7 478 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 TGFB1I1O43294 461 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF33AQ06730 810 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 BAXQ07812 192 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 NAA40Q86UY6 237 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 TINAGL1Q9GZM7 467 aaPredicted RBP15.58■□□□□ 0.09
PTCH1-201ENST00000331920 DISP2A7MBM2 1401 aa15.58■□□□□ 0.09
PTCH1-201ENST00000331920 F2RL1P55085 397 aa15.58■□□□□ 0.08
PTCH1-201ENST00000331920 CHDHQ8NE62 594 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-201ENST00000331920 OR1E3Q8WZA6 343 aa15.58■□□□□ 0.08
PTCH1-201ENST00000331920 GOLT1BQ9Y3E0 138 aa15.58■□□□□ 0.08
PTCH1-201ENST00000331920 HEMK1Q9Y5R4 338 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-201ENST00000331920 A0A1W2PQL4 384 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms