RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MRPL57Q9BQC6 102 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 ERVK-6Q9BXR3 956 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 METTL7AQ9H8H3 244 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 NGBQ9NPG2 151 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 FANCFQ9NPI8 374 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 PSMC3IPQ9P2W1 217 aaPredicted RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 EXO1Q9UQ84 846 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 ERVK-19Q9WJR5 959 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 FAM153BP0C7A2 387 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 CASP2P42575 452 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 MAGEA12P43365 314 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 SLC37A1P57057 533 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 PHEXP78562 749 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 IGLV3-21P80748 117 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 FAM153CQ494X1 144 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 FBXO48Q5FWF7 155 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 MED27Q6P2C8 311 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 ATG4DQ86TL0 474 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 MYLK4Q86YV6 388 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 TEX9Q8N6V9 391 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 DOK4Q8TEW6 326 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 ROGDIQ9GZN7 287 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 COPS7BQ9H9Q2 264 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
CTHRC1-201ENST00000330295 PLCE1Q9P212 2302 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 UQCRHLA0A096LP55 91 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 OR6C76A6NM76 312 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 ESPNB1AK53 854 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 FGF17O60258 216 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 TAC1P20366 129 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 ARL1P40616 181 aaPredicted RBP13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 C21orf58P58505 322 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 PLIN5Q00G26 463 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 BSPH1Q075Z2 132 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 C11orf71Q6IPW1 123 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 SLC30A6Q6NXT4 461 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 OR4N5Q8IXE1 308 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 FNDC9Q8TBE3 224 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 ACMSDQ8TDX5 336 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 C3orf49Q96BT1 292 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 S100PBPQ96BU1 408 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 PCDHGA11Q9Y5H2 935 aa13.18□□□□□ -0.3
CTHRC1-201ENST00000330295 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 UGDHO60701 494 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 ICOSLGO75144 302 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 PCNAP12004 261 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 MTHFD2P13995 350 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 SRD5A2P31213 254 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF267Q14586 743 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 CTU2Q2VPK5 515 aaKnown RBP13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 LIPJQ5W064 366 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF793Q6ZN11 406 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 PTGR2Q8N8N7 351 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 OR6K3Q8NGY3 331 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 GPR78Q96P69 363 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 OSBPL11Q9BXB4 747 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 REXO4Q9GZR2 422 aaKnown RBP13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 GALNT9Q9HCQ5 603 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF175Q9Y473 711 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
CTHRC1-201ENST00000330295 CMYA5Q8N3K9 4069 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 STX16-NPEPL1H3BU86 382 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 STX16O14662 325 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 RAMP1O60894 148 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 TNFRSF21O75509 655 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 CLPSP04118 112 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 GSTA1P08263 222 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 PTGDSP41222 190 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 CDH11P55287 796 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 CLDN15P56746 228 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 NRG3P56975 720 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 RPS13P62277 151 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 GTF2H2Q13888 395 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms