RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PDX1P52945 283 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 GPR68Q15743 365 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ENTPD8Q5MY95 495 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3GQ6DHY5 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3CQ6IPX1 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 MARCH9Q86YJ5 346 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3Q8IZP1 549 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 OR6F1Q8NGZ6 308 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 NUFIP1Q9UHK0 495 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 DNAH14Q0VDD8 3507 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 A0A1W2PQU0 124 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF860A6NHJ4 632 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 CENPXA8MT69 81 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 HYAL2Q12891 473 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 PLK5Q496M5 336 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ABI3BPQ7Z7G0 1075 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 GALNT12Q8IXK2 581 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TMEM255BQ8WV15 326 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ZFPM2Q8WW38 1151 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 DCLRE1CQ96SD1 692 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 BCL2L10Q9HD36 194 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TRAPPC4Q9Y296 219 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 BTN3A3O00478 584 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 LIMS3P0CW19 117 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 LIMS4P0CW20 117 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 FUT1P19526 365 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 RAB40BQ12829 278 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 GPR50Q13585 617 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 MLC1Q15049 377 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 C1QTNF7Q9BXJ2 289 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TEX101Q9BY14 249 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 CACYBPQ9HB71 228 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 PCDHGB2Q9Y5G2 931 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 MN1Q10571 1320 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 IQCMA0A1B0GVH7 501 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 HPGDSO60760 199 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CSF3P09919 207 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 F3P13726 295 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 PKLRP30613 574 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CD83Q01151 205 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 GLCCI1Q86VQ1 547 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 OR51G2Q8NGK0 314 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CDS1Q92903 461 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC22A4Q9H015 551 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 MOV10Q9HCE1 1003 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SNX7Q9UNH6 387 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 ZC3H12DA2A288 527 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 AK4P27144 223 aaPredicted RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC1A3P43003 542 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 IL18Q14116 193 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 DEFB134Q4QY38 66 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 KXD1Q9BQD3 176 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 MED20Q9H944 212 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SNRNP200O75643 2136 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 SOCS6O14544 535 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 EIF2S1P05198 315 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CEACAM5P06731 702 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CMPK1P30085 196 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 AHRP35869 848 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 INPP1P49441 399 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 RACK1P63244 317 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 MINDY4Q4G0A6 757 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 FAM111BQ6SJ93 734 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 TEX12Q9BXU0 123 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 ADAP2Q9NPF8 381 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
ATP2C1-201ENST00000328560 NPIPA5A0A0B4J1W7 369 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 NPIPA7E9PJI5 369 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 NPIPA8P0DM63 369 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 KLHL12Q53G59 568 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms