RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DNAJB5O75953 348 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 DXOO77932 396 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 H6PDO95479 791 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 RAB40ALP0C0E4 278 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 TNNI3P19429 210 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 SPINK2P20155 84 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 CD247P20963 164 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PLA2G5P39877 138 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PGDP52209 483 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 RPS18P62269 152 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 MAP4K2Q12851 820 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF267Q14586 743 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 RTP5Q14D33 572 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 EXOSC7Q15024 291 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 SYPL1Q16563 259 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 RPS26P11Q5JNZ5 115 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 KRT73Q86Y46 540 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 OR2L13Q8N349 312 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 VWA5B2Q8N398 1253 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 OR2Y1Q8NGV0 311 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 GIMAP5Q96F15 307 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 TREX2Q9BQ50 279 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 SPATA5L1Q9BVQ7 753 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 BTBD2Q9BX70 525 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ACTRT3Q9BYD9 372 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 TOR3AQ9H497 397 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ADAP2Q9NPF8 381 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 DDX18Q9NVP1 670 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 TMEFF2Q9UIK5 374 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 MYRFQ9Y2G1 1151 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 IGHV3-20A0A0C4DH32 117 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 DUXAA6NLW8 204 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 C17orf105B2RV13 164 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PLOD3O60568 738 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ETS2P15036 469 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 S1PR1P21453 382 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PRKACGP22612 351 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 CD82P27701 267 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 GALNSP34059 522 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 MAN2A2P49641 1150 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 DNASE1L3Q13609 305 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PUM1Q14671 1186 aaKnown RBP eCLIP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ELAVL1Q15717 326 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 DUSP7Q16829 419 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 SMYD1Q8NB12 490 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 APOBEC4Q8WW27 367 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 METTL21AQ8WXB1 218 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 FBXL20Q96IG2 436 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 MS4A4EQ96PG1 132 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 OR7D2Q96RA2 312 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 CNPPD1Q9BV87 410 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 EXD2Q9NVH0 621 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 C19orf53Q9UNZ5 99 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 LIPT1Q9Y234 373 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 ENPP4Q9Y6X5 453 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 A0A087WV62 115 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 A0A0G2JPF8 293 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 LOC101059948A0A1B0GTJ6 334 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 TRABD2BA6NFA1 517 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 PRAMEF25A6NGN4 478 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 HNRNPCL2B2RXH8 293 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 HNRNPCL3B7ZW38 293 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 H3BNH8 94 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 TERTO14746 1132 aaKnown RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 CBX7O95931 251 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 AGR2O95994 175 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 IFNW1P05000 195 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 FESP07332 822 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 HNRNPCL4P0DMR1 293 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 F8A1P23610 371 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 RRM2P31350 389 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 FOLR3P41439 243 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 OR1E2P47887 323 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 KCNJ5P48544 419 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 DUSP8Q13202 625 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 ZIK1Q3SY52 487 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 TMEM205Q6UW68 189 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF555Q8NEP9 628 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 NKD1Q969G9 470 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 C8orf44Q96CB5 159 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 RMND5BQ96G75 393 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 MBOAT4Q96T53 435 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 MRPS26Q9BYN8 205 aaKnown RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 AMBRA1Q9C0C7 1298 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 EQTNQ9NQ60 294 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 FAM118AQ9NWS6 357 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 CALML5Q9NZT1 146 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 TCFL5Q9UL49 500 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 ERVK-19Q9WJR5 959 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 FARSAQ9Y285 508 aaKnown RBP17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 SH3GLB1Q9Y371 365 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 AKAP13Q12802 2813 aa17.41■□□□□ 0.38
EXOSC3-201ENST00000327304 CYC1P08574 325 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 SMIM18P0DKX4 95 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 RHCEP18577 417 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 TNFRSF1BP20333 461 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 IGFBP5P24593 272 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 SSTR4P31391 388 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms