RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PTGER1P34995 402 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CA5AP35218 305 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FAM69BQ5VUD6 431 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 C2CD4AQ8NCU7 369 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 FCRL5Q96RD9 977 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GPR22Q99680 433 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TLR9Q9NR96 1032 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PURGQ9UJV8 347 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 KIF1AQ12756 1690 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ANKRD66B4E2M5 251 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 H3BMQ9 156 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 AOC2O75106 756 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CSTAP01040 98 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ADORA3P0DMS8 318 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CDK2P24941 298 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CNR2P34972 360 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 DNAJB13P59910 316 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GALNT1Q10472 559 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 CRHR2Q13324 411 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 C1orf61Q13536 156 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 DPF1Q92782 380 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 COG8Q96MW5 612 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TDP1Q9NUW8 608 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 EPOP01588 193 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TMEM225BP0DP42 221 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 UGT2B7P16662 529 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CASP3P42574 277 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF763Q0D2J5 394 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TMPPEQ6ZT21 453 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZSWIM9Q86XI8 627 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SLC5A8Q8N695 610 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PRTFDC1Q9NRG1 225 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 C19orf25Q9UFG5 118 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 SCN9AQ15858 1988 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GGT3PA6NGU5 568 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CX3CR1P49238 355 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 KDM8Q8N371 416 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TSACCQ96A04 125 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 PINK1Q9BXM7 581 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SPATA6Q9NWH7 488 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 NUBP2Q9Y5Y2 271 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SOCS7O14512 581 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LATO43561 262 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SDC3O75056 442 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PLEKHN1Q494U1 663 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF678Q5SXM1 525 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TOMM40LQ969M1 308 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 METTL2AQ96IZ6 378 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF681Q96N22 645 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FCRL3Q96P31 734 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 LEFTY2O00292 366 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GAAP10253 952 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CERS1P27544 350 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FABP6P51161 128 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GPR33Q49SQ1 333 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ACTL8Q9H568 366 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SLC6A5Q9Y345 797 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF175Q9Y473 711 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PLEKHM1Q9Y4G2 1056 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 MEIOCA2RUB1 952 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CDK4P11802 303 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FBLP22087 321 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 HLA-DMAP28067 261 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 AGTR1P30556 359 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PITPNBP48739 271 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PPT1P50897 306 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 RAB5CP51148 216 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CRYZQ08257 329 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 HNF4GQ14541 408 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 OR4K13Q8NH42 304 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 KIAA1143Q96AT1 154 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF514Q96K75 400 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 ATG4BQ9Y4P1 393 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 EEDO75530 441 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 BMP1P13497 986 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 EDN3P14138 238 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TLE1Q04724 770 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 LIPJQ5W064 366 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LCN10Q6JVE6 187 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 USP53Q70EK8 1073 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LINC00471Q8N535 108 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 OR51T1Q8NGJ9 327 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SGTBQ96EQ0 304 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SLC29A1Q99808 456 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 BTBD2Q9BX70 525 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FKRPQ9H9S5 495 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 TESQ9UGI8 421 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 CA14Q9ULX7 337 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CRTAPO75718 401 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZNF84P51523 738 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LY6G5CQ5SRR4 150 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CDCA2Q69YH5 1023 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 SLC27A4Q6P1M0 643 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 ZMYND19Q96E35 227 aaPredicted RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 GPR174Q9BXC1 333 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FAM120CQ9NX05 1096 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 RAC2P15153 192 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms