RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SIX6O95475 246 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SLBPQ14493 270 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DNM1P34Q6PK57 102 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ISCA2Q86U28 154 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RGL4Q8IZJ4 473 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 OR52B6Q8NGF0 335 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 EMID1Q96A84 441 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ADAD1Q96M93 576 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CREBBPQ92793 2442 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF208O43345 1280 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 OR1F1O43749 312 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 EDNRBP24530 442 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CALCRP30988 508 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ACVR1BP36896 505 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ENPP2Q13822 863 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 C1orf220Q5T0J3 134 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 UBXN11Q5T124 520 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PRSS55Q6UWB4 352 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 FAM110BQ8TC76 370 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 NOX3Q9HBY0 568 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ENPP3O14638 875 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 MRPL3P09001 348 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ACP2P11117 423 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 MLLT10P55197 1068 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CLDN20P56880 219 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SLC10A2Q12908 348 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ARFRP1Q13795 201 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SLC10A6Q3KNW5 377 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PRSS42Q7Z5A4 293 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 THOC6Q86W42 341 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM173Q86WV6 379 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ANKLE1Q8NAG6 615 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 FOXRED1Q96CU9 486 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM41AQ96HV5 264 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CLMPQ9H6B4 373 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 COL2A1P02458 1487 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PI15O43692 258 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RGS11O94810 467 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GCGRP47871 477 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 HOXA1P49639 335 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DGKEP52429 567 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GPLD1P80108 840 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GALK2Q01415 458 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RAB33AQ14088 237 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TOMM20Q15388 145 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF362Q5T0B9 420 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 C15orf39Q6ZRI6 1047 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 OR13C3Q8NGS6 347 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 C12orf42Q96LP6 360 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DPEP2Q9H4A9 486 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 C19orf12Q9NSK7 152 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZDHHC3Q9NYG2 299 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SLC23A1Q9UHI7 598 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SCO1O75880 301 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 LATS1O95835 1130 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GJB1P08034 283 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PFKLP17858 780 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 BDKRB2P30411 391 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CRYBB1P53674 252 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 IL13RA1P78552 427 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GHRHRQ02643 423 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CTF1Q16619 201 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CHRFAM7AQ494W8 412 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 C3orf38Q5JPI3 329 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DPY19L2P1Q6NXN4 242 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF101Q8IZC7 436 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ABHD16BQ9H3Z7 469 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 MRPL15Q9P015 296 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 VAPAQ9P0L0 249 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 KIAA1522Q9P206 1035 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RASD1Q9Y272 281 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GABRPO00591 440 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 UGDHO60701 494 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DFFBO76075 338 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 HSD11B1P28845 292 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 LUMP51884 338 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PCBP2Q15366 365 aaKnown RBP eCLIP6.7□□□□□ -1.344e-19■■■■■ 31.2
SMC1A-201ENST00000322213 ALKBH2Q6NS38 261 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SMIM15Q7Z3B0 74 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PCSK9Q8NBP7 692 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RNF141Q8WVD5 230 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 MARC2Q969Z3 335 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RBM14Q96PK6 669 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 UHRF1Q96T88 793 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 GABARAPL1Q9H0R8 117 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 NMUR1Q9HB89 426 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 HEBP2Q9Y5Z4 205 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 NRP1O14786 923 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SCGB1D1O95968 90 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RAB40ALP0C0E4 278 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ACRV1P26436 265 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 NR0B1P51843 470 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SNRPGP62308 76 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms