RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-201ENST00000320755 TBC1D29Q9UFV1 150 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CLCA2Q9UQC9 943 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 POM121BA6NF01 834 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 CASKO14936 926 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 FUT1P19526 365 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 IFNA8P32881 189 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 IFNGR2P38484 337 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 FABP5Q01469 135 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 SMARCD3Q6STE5 483 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF517Q6ZMY9 492 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 OR7G2Q8NG99 324 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 DCLRE1CQ96SD1 692 aaKnown RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 KLHL28Q9NXS3 571 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 PLEKHB1Q9UF11 243 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 EYSQ5T1H1 3165 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 H0Y8X5 98 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 RNGTTO60942 597 aaKnown RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 LIMS3P0CW19 117 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 LIMS4P0CW20 117 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 RPS21P63220 83 aaKnown RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 TSPAN31Q12999 210 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 C3orf38Q5JPI3 329 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 LINC00471Q8N535 108 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 NLGN4YQ8NFZ3 816 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 OR4Q3Q8NH05 313 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 ZFPM2Q8WW38 1151 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 UFD1Q92890 307 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF764Q96H86 408 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 TIMM29Q9BSF4 260 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 APOOQ9BUR5 198 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 SRRQ9GZT4 340 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 TTC36A6NLP5 189 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 SNTNA6NMZ2 147 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 CACNB4O00305 520 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 EIF2S1P05198 315 aaKnown RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 RFX3P48380 749 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 GAS1P54826 345 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 RAB40BQ12829 278 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF784Q8NCA9 323 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 SFXN5Q8TD22 340 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 DIO2Q92813 273 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 TBX5Q99593 518 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 RAB11FIP5Q9BXF6 653 aa16.3■□□□□ 0.2
COL9A1-201ENST00000320755 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-201ENST00000320755 CENPVL1A0A0U1RR11 272 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 AHRP35869 848 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 EFNB1P98172 346 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 DMPKQ09013 629 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 PLK5Q496M5 336 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 SLC35F1Q5T1Q4 408 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 AMIGO1Q86WK6 493 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 OR10G6Q8NH81 332 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 NPIPA5A0A0B4J1W7 369 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 NPIPA7E9PJI5 369 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 PRICKLE3O43900 615 aaPredicted RBP16.29■□□□□ 0.2
COL9A1-201ENST00000320755 GKN3PP0CG01 181 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 NPIPA8P0DM63 369 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 CPN2P22792 545 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 HTR3AP46098 478 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 SLC9A3P48764 834 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 STXBP1P61764 594 aaKnown RBP16.29■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM31Q5JXX7 168 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 RAB43Q86YS6 212 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 TSACCQ96A04 125 aaPredicted RBP16.29■□□□□ 0.2
COL9A1-201ENST00000320755 SAMD8Q96LT4 415 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF681Q96N22 645 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 BEX2Q9BXY8 128 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 ACTRT3Q9BYD9 372 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 SLC7A7Q9UM01 511 aa16.29■□□□□ 0.2
COL9A1-201ENST00000320755 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SLC35F4A4IF30 521 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 A6NL46 340 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 ADH1BP00325 375 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 IL1AP01583 271 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 THY1P04216 161 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 OMPP47874 163 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SCN1BQ07699 218 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 DDI2Q5TDH0 399 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 GDF7Q7Z4P5 450 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 VN1R4Q7Z5H5 301 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 NRROSQ86YC3 692 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SRFBP1Q8NEF9 429 aaKnown RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 C1QTNF2Q9BXJ5 285 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 MED20Q9H944 212 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 ADAP2Q9NPF8 381 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM74BQ9NUR3 256 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF221Q9UK13 617 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 TRAPPC4Q9Y296 219 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 RWDD3Q9Y3V2 267 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SOCS6O14544 535 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 TCEA1P23193 301 aaKnown RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 FAM214AQ32MH5 1076 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 UBQLNLQ8IYU4 475 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms