RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ST3GAL3Q11203 375 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 FZD5Q13467 585 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 GINS1Q14691 196 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 LARS2Q15031 903 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 ELOCQ15369 112 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 MED22Q15528 200 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PRICKLE4Q2TBC4 344 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ENTPD8Q5MY95 495 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 LINC00471Q8N535 108 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 OR8J1Q8NGP2 316 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 GPR151Q8TDV0 419 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 TRUB1Q8WWH5 349 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 DIO2Q92813 273 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 DTNBP1Q96EV8 351 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 HSPBAP1Q96EW2 488 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 SLC38A3Q99624 504 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 MCHR1Q99705 422 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ARHGDIGQ99819 225 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 EGLN3Q9H6Z9 239 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PRDM9Q9NQV7 894 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 FBXO34Q9NWN3 711 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ZNF443Q9Y2A4 671 aaPredicted RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 IFT52Q9Y366 437 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 TDRD6O60522 2096 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 KRBA1A5PL33 1030 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 J3QRK9 145 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CHST10O43529 356 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PRKYO43930 277 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PLOD3O60568 738 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 SDC3O75056 442 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 NADKO95544 446 aaPredicted RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 ALOX5P09917 674 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 SNRPGP62308 76 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 TRAM2Q15035 370 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 SMAD2Q15796 467 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 MAPK14Q16539 360 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 NDUFA9Q16795 377 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ARMCX4Q5H9R4 360 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 FHL5Q5TD97 284 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 C12orf73Q69YU5 71 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PLAG1Q6DJT9 500 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ACSM5Q6NUN0 579 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 KLHL35Q6PF15 583 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PLEKHM3Q6ZWE6 761 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CROCCP3Q8IVE0 287 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 NKAIN4Q8IVV8 208 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 SLC15A4Q8N697 577 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 COX18Q8N8Q8 333 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 ANKRD9Q96BM1 317 aaPredicted RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 FAM46AQ96IP4 442 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 Q96MT0 163 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 OR5M11Q96RB7 305 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 BCL7BQ9BQE9 202 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PLA2G12AQ9BZM1 189 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 IRAK4Q9NWZ3 460 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 MAT2BQ9NZL9 334 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 HCN3Q9P1Z3 774 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 A0A087WV62 115 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 NPIPA5A0A0B4J1W7 369 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 OR2W5A6NFC9 320 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 AGAP5A6NIR3 686 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 NPIPA7E9PJI5 369 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 AIREO43918 545 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 OR10H2O60403 315 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 STX11O75558 287 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 NPIPA8P0DM63 369 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 GABRA3P34903 492 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 IFNGR2P38484 337 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 C21orf59P57076 290 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ALDH6A1Q02252 535 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 RPL6Q02878 288 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 MAP4K2Q12851 820 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SLC13A2Q13183 592 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ERV3-1Q14264 604 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CLEC12AQ5QGZ9 265 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DCST2Q5T1A1 773 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CD300LDQ6UXZ3 194 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ZNF836Q6ZNA1 936 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DGAT2L6Q6ZPD8 337 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 GJD3Q8N144 294 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CDRT4Q8N9R6 151 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 WDR36Q8NI36 951 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CDCA4Q9BXL8 241 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ALOXE3Q9BYJ1 711 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ZNF350Q9GZX5 532 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ZBTB20Q9HC78 741 aaPredicted RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 CNOT2Q9NZN8 540 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 NDOR1Q9UHB4 597 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 CORINQ9Y5Q5 1042 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 PEX12O00623 359 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 THY1P04216 161 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 GKN3PP0CG01 181 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 GSTM3P21266 225 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms