RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 HEY2Q9UBP5 337 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 GRID1Q9ULK0 1009 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 EIF3LQ9Y262 564 aaKnown RBP12.87□□□□□ -0.35
RPP40-201ENST00000319533 ARID1AO14497 2285 aa12.87□□□□□ -0.35
RPP40-201ENST00000319533 JMJD1CQ15652 2540 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 DEFB108AA8MXU0 73 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 REM1O75628 298 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 KRT6AP02538 564 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 KRT6BP04259 564 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 NUDT17P0C025 328 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 KRT4P19013 534 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 CRHR1P34998 444 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 MC3RP41968 323 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 KRT6CP48668 564 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 NAA20P61599 178 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 FAM27E3Q08E93 113 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 LCP2Q13094 533 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 UNC50Q53HI1 259 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 OR2A2Q6IF42 318 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 Q71RC1 249 aaPredicted RBP12.86□□□□□ -0.35
RPP40-201ENST00000319533 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
RPP40-201ENST00000319533 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 PIGTQ969N2 578 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 SFXN2Q96NB2 322 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
RPP40-201ENST00000319533 VPS29Q9UBQ0 182 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 MCM8Q9UJA3 840 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 MID2Q9UJV3 735 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 UTS2RQ9UKP6 389 aa12.86□□□□□ -0.35
RPP40-201ENST00000319533 PLOD3O60568 738 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 OR4F21O95013 312 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 HSD3B1P14060 373 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 GRK2P25098 689 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 HSD3B2P26439 372 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 DPP4P27487 766 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 HMOX2P30519 316 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 CD79BP40259 229 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 PNLIPRP2P54317 469 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 PKNOX1P55347 436 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 CORO7P57737 925 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 ZNF474Q6S9Z5 364 aaPredicted RBP12.85□□□□□ -0.35
RPP40-201ENST00000319533 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 ZYG11AQ6WRX3 759 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 SH2D5Q6ZV89 423 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
RPP40-201ENST00000319533 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 CCNYL1Q8N7R7 359 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 CDYL2Q8N8U2 506 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 FADS6Q8N9I5 356 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 MARK4Q96L34 752 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 EMCNQ9ULC0 261 aa12.85□□□□□ -0.35
RPP40-201ENST00000319533 SMPD2O60906 423 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 LY6G6DO95868 133 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 CGAP01215 116 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 PROCP04070 461 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 ENO1P06733 434 aaKnown RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 PEPDP12955 493 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 CRYGSP22914 178 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 KIR2DL2P43627 348 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 ALDH9A1P49189 494 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 DSCR4P56555 118 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 CLDN15P56746 228 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 RAE1P78406 368 aaKnown RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 Q5PR19 223 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 LARP4Q71RC2 724 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPP40-201ENST00000319533 BTLAQ7Z6A9 289 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 OR9A2Q8NGT5 310 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 OR2W6PQ8NHA6 318 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 C11orf24Q96F05 449 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 ROPN1BQ9BZX4 212 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 ZNF395Q9H8N7 513 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 ROPN1Q9HAT0 212 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 ELOVL5Q9NYP7 299 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 ZNF226Q9NYT6 803 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 C6orf203Q9P0P8 240 aaPredicted RBP12.84□□□□□ -0.35
RPP40-201ENST00000319533 DKKL1Q9UK85 242 aa12.84□□□□□ -0.35
RPP40-201ENST00000319533 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 SLC22A20A6NK97 555 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 G3V2L1 256 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 H3BQF6 201 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 LINC01387J3KSC0 135 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 MANBAO00462 879 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 EMC8O43402 210 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 FADS1O60427 444 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 PLIN3O60664 434 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms