RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SIAH3Q8IW03 269 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TMEM185AQ8NFB2 350 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TSEN15Q8WW01 171 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NEIL2Q969S2 332 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CREB3L1Q96BA8 519 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 UPRTQ96BW1 309 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 BARHL1Q9BZE3 327 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 IL23AQ9NPF7 189 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ASF1BQ9NVP2 202 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 BTNL2Q9UIR0 455 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 AP1M2Q9Y6Q5 423 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 EYSQ5T1H1 3165 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 A0A1W2PRQ8 180 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 METTL21EPA6NDL7 271 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 GOSR2O14653 212 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TSPAN12O95859 305 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ALPPP05187 535 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PTH2RP49190 550 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 OR10A3P58181 314 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ERVK-21P61565 698 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 KCNJ10P78508 379 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ELAVL2Q12926 359 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ASAH1Q13510 395 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF169Q14929 603 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PCBP1Q15365 356 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 GPR33Q49SQ1 333 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 IRAK1BP1Q5VVH5 260 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ACSM5Q6NUN0 579 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 IDO2Q6ZQW0 420 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 SSX6Q7RTT6 188 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PARGQ86W56 976 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ACBD7Q8N6N7 88 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 HORMAD2Q8N7B1 307 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 OR52I1Q8NGK6 324 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 DCLRE1CQ96SD1 692 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 MGME1Q9BQP7 344 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 FANCFQ9NPI8 374 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ACOXLQ9NUZ1 547 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 B3GNT2Q9NY97 397 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 EXOSC1Q9Y3B2 195 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 NAALAD2Q9Y3Q0 740 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PCDHGA2Q9Y5H1 932 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 KANTRA0A1W2PQU2 76 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 MTMR11A4FU01 709 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 SOCS6O14544 535 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ADAM12O43184 909 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ERI3O43414 337 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF821O75541 412 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 OR6A2O95222 327 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TCRBP04435 133 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 AOAHP28039 575 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 SOX9P48436 509 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TPMTP51580 245 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 AP1S2P56377 157 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 STXBP1P61764 594 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 FABP5Q01469 135 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ARSIQ5FYB1 569 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PIP5KL1Q5T9C9 394 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 KHDRBS2Q5VWX1 349 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 GPR155Q7Z3F1 870 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 FAM220AQ7Z4H9 259 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PAQR7Q86WK9 346 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TBC1D19Q8N5T2 526 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF454Q8N9F8 522 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 WDR20Q8TBZ3 569 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ADAMTS19Q8TE59 1207 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 CREB3L4Q8TEY5 395 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 C16orf78Q8WTQ4 265 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 UBE2E3Q969T4 207 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF566Q969W8 418 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 AIF1LQ9BQI0 150 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 SLC6A16Q9GZN6 736 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TRPV4Q9HBA0 871 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 CNOT2Q9NZN8 540 aaKnown RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TBX21Q9UL17 535 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 A0A1B0GVI7 797 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 GRXCR2A6NFK2 248 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 ANKRD61A6NGH8 418 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 LEUTXA8MZ59 168 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 LATO43561 262 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 CREBL2O60519 120 aaPredicted RBP7.1□□□□□ -1.27
CDHR3-201ENST00000317716 SLC19A2O60779 497 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 RAF1P04049 648 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PTHLHP12272 177 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 CD9P21926 228 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PDHA2P29803 388 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 AP3S2P59780 193 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 PITPNAQ00169 270 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 TMEM69Q5SWH9 247 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 MEDAGQ5VYS4 303 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 GDPGP1Q6ZNW5 385 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 NDUFAF7Q7L592 441 aa7.1□□□□□ -1.27
CDHR3-201ENST00000317716 OR4N5Q8IXE1 308 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms