RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MED11Q9P086 117 aa15.77■□□□□ 0.12
EXOSC4-201ENST00000316052 NDRG3Q9UGV2 375 aa15.77■□□□□ 0.12
EXOSC4-201ENST00000316052 OR10H1Q9Y4A9 318 aa15.77■□□□□ 0.12
EXOSC4-201ENST00000316052 DSCAMO60469 2012 aa15.77■□□□□ 0.11
EXOSC4-201ENST00000316052 MSTNO14793 375 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 CASKO14936 926 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 SCO2O43819 266 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 JUNP05412 331 aaKnown RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 ANXA4P09525 319 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 CPOXP36551 454 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 SUCLG1P53597 346 aaKnown RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 FOXA1P55317 472 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 PSPHP78330 225 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 C2orf80Q0P641 193 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 LCP2Q13094 533 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 LGSNQ5TDP6 509 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 ZNF474Q6S9Z5 364 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 Q71RC1 249 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 P4HA3Q7Z4N8 544 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 BTLAQ7Z6A9 289 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 UBQLNLQ8IYU4 475 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 OR5M1Q8NGP8 315 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 FIG4Q92562 907 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 L3HYPDHQ96EM0 354 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 STMN4Q9H169 189 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 BEX4Q9NWD9 120 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 SIRT5Q9NXA8 310 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 C6orf203Q9P0P8 240 aaPredicted RBP15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 PPP4R1LQ9P1A2 415 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 ZNF337Q9Y3M9 751 aa15.76■□□□□ 0.11
EXOSC4-201ENST00000316052 SERTM1A2A2V5 107 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 SLC22A20A6NK97 555 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 GOLGA8RI6L899 631 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 UBFD1O14562 309 aaKnown RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 SMNDC1O75940 238 aaKnown RBP eCLIP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 ENO1P06733 434 aaKnown RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 CRHP06850 196 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 PEPDP12955 493 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 HK1P19367 917 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 DDCP20711 480 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 MC3RP41968 323 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 PKNOX1P55347 436 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 NKX6-1P78426 367 aaPredicted RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 ZNF155Q12901 538 aaPredicted RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 SH2D4BQ5SQS7 431 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 BIVMQ86UB2 503 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 CNEP1R1Q8N9A8 125 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 DTNBP1Q96EV8 351 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 C18orf12Q96KH6 178 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 OPN3Q9H1Y3 402 aaPredicted RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 GSTO2Q9H4Y5 243 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 KLHL28Q9NXS3 571 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 SENP1Q9P0U3 644 aa15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 C19orf53Q9UNZ5 99 aaPredicted RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 EIF3LQ9Y262 564 aaKnown RBP15.75■□□□□ 0.11
EXOSC4-201ENST00000316052 A0A087WV62 115 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 DEFB108AA8MXU0 73 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 UPK1AO00322 258 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 CTIFO43310 598 aaKnown RBP15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 PSMG1O95456 288 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 ABHD2P08910 425 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 NCBP2P52298 156 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■□□□ 12.2
EXOSC4-201ENST00000316052 MRPS22P82650 360 aaKnown RBP15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 LTBQ06643 244 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 STX5Q13190 355 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 CYP27C1Q4G0S4 372 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 SPDYAQ5MJ70 313 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 OR2A2Q6IF42 318 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 FAM71E1Q6IPT2 247 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 TMEM107Q6UX40 140 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 CHMP1BQ7LBR1 199 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 LCA5Q86VQ0 697 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 SLC22A9Q8IVM8 553 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 CDC26Q8NHZ8 85 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 DUSP19Q8WTR2 217 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 PGM2Q96G03 612 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 GLIPR2Q9H4G4 154 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 MID1IP1Q9NPA3 183 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 TAS2R7Q9NYW3 318 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 NFU1Q9UMS0 254 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 USF3Q68DE3 2245 aa15.74■□□□□ 0.11
EXOSC4-201ENST00000316052 OR2M5A3KFT3 312 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 COQ9O75208 318 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 CGAP01215 116 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 INHBBP09529 407 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 PYGBP11216 843 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 CD79BP40259 229 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 PCYT1AP49585 367 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 CLDN20P56880 219 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 ZNF763Q0D2J5 394 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 GLE1Q53GS7 698 aaKnown RBP15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 RAET1LQ5VY80 246 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 C22orf34Q6ZV56 151 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 MARCH3Q86UD3 253 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 MEIOBQ8N635 442 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 ELP4Q96EB1 424 aa15.73■□□□□ 0.11
EXOSC4-201ENST00000316052 FAM111AQ96PZ2 611 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms