RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TRIM8Q9BZR9 551 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 BHLHE41Q9C0J9 482 aaPredicted RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 ZDHHC11Q9H8X9 412 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 PNPLA3Q9NST1 481 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 KLRF1Q9NZS2 232 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 SLAMF8Q9P0V8 285 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 ICE1Q9Y2F5 2266 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 TRPC5OSA6NMA1 111 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 EDF1O60869 148 aaKnown RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TRAPPC6AO75865 159 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 KCNK2O95069 426 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 GAS1P54826 345 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MAD2L1Q13257 205 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TOMM20Q15388 145 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 GRAMD1BQ3KR37 738 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 SPDYE7PQ495Y7 208 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CRYBG3Q68DQ2 2970 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 GK5Q6ZS86 529 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CAMKMTQ7Z624 323 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 IL1RL2Q9HB29 575 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ZFP64Q9NPA5 681 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 FGFR1OP2Q9NVK5 253 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 NTMQ9P121 344 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CFL2Q9Y281 166 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 USP9YO00507 2555 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 RNF103-CHMP3A0A140T963 221 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 UBDO15205 165 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 OIP5O43482 229 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 FCMRO60667 390 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ABCB7O75027 752 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 COQ9O75208 318 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 NKX2-2O95096 273 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 LDLRP01130 860 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TPOP07202 933 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 GDF1P27539 372 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 IL12BP29460 328 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MASP1P48740 699 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 STARP49675 285 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 C21orf58P58505 322 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MLC1Q15049 377 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TIGD2Q4W5G0 525 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 COX20Q5RI15 118 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TNFAIP8L2Q6P589 184 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 SLC2A7Q6PXP3 512 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CD163Q86VB7 1156 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 C10orf111Q8N326 155 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MARVELD2Q8N4S9 558 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 FAM26EQ8N5C1 309 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 C7orf57Q8NEG2 295 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CEP70Q8NHQ1 597 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ZFP28Q8NHY6 868 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 PSMA8Q8TAA3 256 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ACTRT2Q8TDY3 377 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 HOXB13Q92826 284 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MS4A4EQ96PG1 132 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 OR7D2Q96RA2 312 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 OR52E6Q96RD3 313 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 UBQLN3Q9H347 655 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 TCF7L2Q9NQB0 619 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 ALKBH4Q9NXW9 302 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 MED11Q9P086 117 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 KCNE5Q9UJ90 142 aa10.99□□□□□ -0.65
SCFD1-201ENST00000311943 RPH3AQ9Y2J0 694 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 FLNBO75369 2602 aaKnown RBP10.99□□□□□ -0.65
SCFD1-201ENST00000311943 PRAMEF25A6NGN4 478 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 OR6C70A6NIJ9 312 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 CCL21O00585 134 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 ACOX3O15254 700 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 FADS1O60427 444 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 BCAS1O75363 584 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-201ENST00000311943 BCAS2O75934 225 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-201ENST00000311943 UTS2O95399 124 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 PGRP06401 933 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 STSP08842 583 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 PTPN6P29350 595 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 S100A3P33764 101 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 DCAF7P61962 342 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 FUT5Q11128 374 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 CD226Q15762 336 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 SMU1Q2TAY7 513 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 TRILQ7L0X0 811 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 NUP54Q7Z3B4 507 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 SPATA19Q7Z5L4 167 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 FAM109AQ8N4B1 249 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 TESCQ96BS2 214 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 ZG16BQ96DA0 208 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 QRSL1Q9H0R6 528 aaKnown RBP10.98□□□□□ -0.65
SCFD1-201ENST00000311943 Q9N2J8 555 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 SDR39U1Q9NRG7 319 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-201ENST00000311943 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 CCDC167Q9P0B6 97 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF835Q9Y2P0 537 aa10.98□□□□□ -0.65
SCFD1-201ENST00000311943 SPTAN1Q13813 2472 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms