RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MED20Q9H944 212 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 ZCCHC3Q9NUD5 404 aaKnown RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RABL2AQ9UBK7 228 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 FBXO9Q9UK97 447 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 C7orf66A4D0T2 115 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RGS11O94810 467 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 C1orf105O95561 183 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 H2AFB2P0C5Z0 115 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RRASP10301 218 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 EFNB1P98172 346 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 TMEM115Q12893 351 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RIN1Q13671 783 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 PIP5KL1Q5T9C9 394 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 CD276Q5ZPR3 534 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 SMARCD3Q6STE5 483 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 NXPE4Q6UWF7 544 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 PRSS45Q7RTY3 260 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 CPOQ8IVL8 374 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 ZNF485Q8NCK3 441 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 TRMT10AQ8TBZ6 339 aaKnown RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 LINC00052Q96N35 136 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 BTBD1Q9H0C5 482 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 NTNG1Q9Y2I2 539 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 CHST2Q9Y4C5 530 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 YIPF1Q9Y548 306 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 PLPP1O14494 284 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 PRKACAP17612 351 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 AHRP35869 848 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 STXBP1P61764 594 aaKnown RBP13.78□□□□□ -0.2
COL6A2-202ENST00000310645 TSPAN5P62079 268 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 SLC25A35Q3KQZ1 300 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 FGF11Q92914 225 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RFKQ969G6 155 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 SLC35G5Q96KT7 338 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 OR2M2Q96R28 347 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 GSX2Q9BZM3 304 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 DLL4Q9NR61 685 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 FLVCR2Q9UPI3 526 aa13.78□□□□□ -0.2
COL6A2-202ENST00000310645 RNF13O43567 381 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 FZD7O75084 574 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 RGS9O75916 674 aaPredicted RBP13.77□□□□□ -0.2
COL6A2-202ENST00000310645 HPXP02790 462 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 GSTM3P21266 225 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 HBMQ6B0K9 141 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 ZNF322Q6U7Q0 402 aaPredicted RBP13.77□□□□□ -0.2
COL6A2-202ENST00000310645 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 OAFQ86UD1 273 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 SIRT6Q8N6T7 355 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.2
COL6A2-202ENST00000310645 KAT2AQ92830 837 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 VOPP1Q96AW1 172 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 CASD1Q96PB1 797 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 TTTY10Q9BZA0 68 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 PPA2Q9H2U2 334 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 SLC13A4Q9UKG4 626 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 NUBP2Q9Y5Y2 271 aa13.77□□□□□ -0.2
COL6A2-202ENST00000310645 FEZF1A0PJY2 475 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 POP4O95707 220 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 PROS1P07225 676 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ICAM2P13598 275 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 TBXA2RP21731 343 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 SELENOPP49908 381 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ENTPD8Q5MY95 495 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 LHFPL5Q8TAF8 219 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ACOT12Q8WYK0 555 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 KCNN2Q9H2S1 579 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 MRPS18AQ9NVS2 196 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 PRKRAO75569 313 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ERAL1O75616 437 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 CFL1P23528 166 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 LCN1P31025 176 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 VIPR1P32241 457 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 ACVR1BP36896 505 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 LASP1Q14847 261 aaKnown RBP13.77□□□□□ -0.21
COL6A2-202ENST00000310645 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 OR10H4Q8NGA5 316 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 BBS10Q8TAM1 723 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 TM4SF18Q96CE8 201 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 DDOQ99489 341 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
COL6A2-202ENST00000310645 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms