RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 HERPUD2Q9BSE4 406 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KLF16Q9BXK1 252 aaPredicted RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 MFFQ9GZY8 342 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 GPATCH2Q9NW75 528 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 ALKBH4Q9NXW9 302 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TAS2R8Q9NYW2 309 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 IL37Q9NZH6 218 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 EPHA6Q9UF33 1036 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TRAPPC13A5PLN9 417 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 AIPO00170 330 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF821O75541 412 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 LEFTY1O75610 366 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 POU2F2P09086 479 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 RAB4AP20338 218 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 COQ5Q5HYK3 327 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 RAB41Q5JT25 222 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 LCN8Q6JVE9 175 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 MYADMQ96S97 322 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 POLDIP3Q9BY77 421 aaKnown RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 GPN2Q9H9Y4 310 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 MMP17Q9ULZ9 603 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 COL4A5P29400 1685 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ANKRD33BA6NCL7 494 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 WASHC1A8K0Z3 465 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 RNF13O43567 381 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 RAD51DO75771 328 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ATE1O95260 518 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ATP1B2P14415 290 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 IL9P15248 144 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GSTM4Q03013 218 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GRIK2Q13002 908 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GPR19Q15760 415 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GLYATL2Q8WU03 294 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 MSLNLQ96KJ4 702 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 KCNJ16Q9NPI9 418 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PIGVQ9NUD9 493 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 OR6C2Q9NZP2 312 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 QSER1Q2KHR3 1735 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 A0A0U1RQK1 487 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 POM121CA8CG34 1229 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF850A8MQ14 1090 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ATP6V1G2-DDX39BF2Z307 99 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PRAMEF2O60811 474 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 COQ9O75208 318 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 B3GALNT1O75752 331 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 SOX30O94993 753 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 CD3GP09693 182 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GGT1P19440 569 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 BDKRB2P30411 391 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GRPRP30550 384 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 KDELR2P33947 212 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PPA1Q15181 289 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 RNASE10Q5GAN6 216 aaKnown RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 HES5Q5TA89 166 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 C1orf94Q6P1W5 598 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 SYT14Q8NB59 555 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 OR13C3Q8NGS6 347 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF689Q96CS4 500 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 SLC41A3Q96GZ6 507 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 QRSL1Q9H0R6 528 aaKnown RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 REEP4Q9H6H4 257 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 NTN4Q9HB63 628 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 B3GNT3Q9Y2A9 372 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ASB4Q9Y574 426 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 LOC105369274A0A096LPK9 316 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 A0A1W2PPL8 197 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ICMTO60725 284 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PRAMEF11O60813 436 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ALDOAP04075 364 aaKnown RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 OR12D1P0DN82 309 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 CDK5R2Q13319 367 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PCGF3Q3KNV8 242 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 SHFQ7M4L6 423 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 GPAT4Q86UL3 456 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 OR4N4Q8N0Y3 316 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 PHOSPHO1Q8TCT1 267 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 DPH2Q9BQC3 489 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 STRA6Q9BX79 667 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 MRM3Q9HC36 420 aaKnown RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 RANGRFQ9HD47 186 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 DLGAP4Q9Y2H0 992 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 AP1M2Q9Y6Q5 423 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 TMEM150CB9EJG8 249 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 LINC01565O15544 149 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF8P17098 575 aaPredicted RBP7.76□□□□□ -1.17
VPS41-202ENST00000310301 CDK2P24941 298 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ACTA2P62736 377 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ACTG2P63267 376 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF763Q0D2J5 394 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 NIPAL4Q0D2K0 466 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 LRRTM3Q86VH5 581 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 FBXO27Q8NI29 283 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 BBS10Q8TAM1 723 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 TM9SF4Q92544 642 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 NINJ1Q92982 152 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 ZNF382Q96SR6 550 aa7.76□□□□□ -1.17
VPS41-202ENST00000310301 AIG1Q9NVV5 245 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms