RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SHOXO15266 292 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 SLC2A10O95528 541 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 CXCL3P19876 107 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 CCR6P51684 374 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 TRAM2Q15035 370 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 C9orf64Q5T6V5 341 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 TPGS2Q68CL5 300 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 TMEM150AQ86TG1 271 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 COMTD1Q86VU5 262 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 LSRQ86X29 649 aaPredicted RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 IQCF2Q8IXL9 164 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR2A12Q8NGT7 310 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF689Q96CS4 500 aaPredicted RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 C17orf62Q9BQA9 187 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 TTTY10Q9BZA0 68 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR51V1Q9H2C8 321 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 DOCK6Q96HP0 2047 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 POP7O75817 140 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 LRG1P02750 347 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 TCRBP04435 133 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 MRPL3P09001 348 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 PTBP1P26599 531 aaKnown RBP eCLIP10.47□□□□□ -0.735e-9■■■■□ 20.4
PTPN7-201ENST00000309017 AHRP35869 848 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR10A3P58181 314 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 HENMT1Q5T8I9 393 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 PLBD1Q6P4A8 553 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 CEACAM19Q7Z692 300 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR11H7Q8NGC8 314 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR5M3Q8NGP4 307 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 RAD51AP1Q96B01 352 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 RBCK1Q9BYM8 510 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ELAC1Q9H777 363 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ISG20L2Q9H9L3 353 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ISYNA1Q9NPH2 558 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 MRPL15Q9P015 296 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 PPIL1Q9Y3C6 166 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 M0R233 179 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 LEFTY2O00292 366 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 PRKRAO75569 313 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 KELP23276 732 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ACVR1BP36896 505 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 GCGRP47871 477 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ST3GAL3Q11203 375 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 HBMQ6B0K9 141 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 KIAA1211LQ6NV74 962 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 CXXC5Q7LFL8 322 aaKnown RBP10.47□□□□□ -0.73
PTPN7-201ENST00000309017 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 NRMQ8IXM6 262 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 FTMTQ8N4E7 242 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ACBD7Q8N6N7 88 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OR5AR1Q8NGP9 310 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 OSTF1Q92882 214 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 IGSF21Q96ID5 467 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 ICKQ9UPZ9 632 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 UNC80Q8N2C7 3258 aa10.47□□□□□ -0.73
PTPN7-201ENST00000309017 RNF13O43567 381 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 REM1O75628 298 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 HRGP04196 525 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 GALEQ14376 348 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 BBS10Q8TAM1 723 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 NXPE2Q96DL1 559 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 SCLYQ96I15 445 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 CAMK1GQ96NX5 476 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 KCNJ15Q99712 375 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 NRTNQ99748 197 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 RSPO3Q9BXY4 272 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 MED20Q9H944 212 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 EMC7Q9NPA0 242 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 CUEDC1Q9NWM3 386 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TMEM5Q9Y2B1 443 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 MAB21L2Q9Y586 359 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ALPK3Q96L96 1907 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ZC3H12DA2A288 527 aaKnown RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 SLC9A3R1O14745 358 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 B4GALT2O60909 372 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 MT-ND4P03905 459 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TIMP2P16035 220 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TSPAN5P62079 268 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TAGLNQ01995 201 aaKnown RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 CRYZQ08257 329 aaKnown RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TSPAN31Q12999 210 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 GNA13Q14344 377 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 COL28A1Q2UY09 1125 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ENTPD8Q5MY95 495 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF322Q6U7Q0 402 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 OR11H4Q8NGC9 324 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 GIMAP1Q8WWP7 306 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ALG8Q9BVK2 526 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 SGPP1Q9BX95 441 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 MAN2C1Q9NTJ4 1040 aa10.46□□□□□ -0.73
PTPN7-201ENST00000309017 ELF5Q9UKW6 265 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-201ENST00000309017 J3QLW9 94 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms