RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 HSPA7P48741 367 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CDKN1CP49918 316 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 HNMTP50135 292 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PHC1P78364 1004 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 OLR1P78380 273 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 IL5RAQ01344 420 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF45Q02386 682 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PRKCDQ05655 676 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ELP6Q0PNE2 266 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CSTF3Q12996 717 aaKnown RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SP140Q13342 867 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 RAPSNQ13702 412 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MAD2L1BPQ15013 274 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 IRF4Q15306 451 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TBCEQ15813 527 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 INAQ16352 499 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CYP2A13Q16696 494 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 WSCD2Q2TBF2 565 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ADPRMQ3LIE5 342 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF805Q5CZA5 627 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SPANXN4Q5MJ08 99 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GPRC6AQ5T6X5 926 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ARMC12Q5T9G4 340 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ZDHHC20Q5W0Z9 365 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TAS2R42Q7RTR8 314 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ADGRE4PQ86SQ3 457 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ADCK1Q86TW2 530 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ARMC8Q8IUR7 673 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ARL14Q8N4G2 192 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ZBTB2Q8N680 514 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 FAM86B1Q8N7N1 296 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 Q8N9G6 341 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TTC29Q8NA56 475 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PLA2G15Q8NCC3 412 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 DENND6BQ8NEG7 585 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GPR156Q8NFN8 814 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 KBTBD8Q8NFY9 601 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CCL4L1Q8NHW4 92 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 C9orf43Q8TAL5 461 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 JPH3Q8WXH2 748 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ASB12Q8WXK4 309 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CFHR4Q92496 578 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 NAT6Q93015 286 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SLC35B4Q969S0 331 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 NCLNQ969V3 563 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 LGALS12Q96DT0 336 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PDXPQ96GD0 296 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TXNDC15Q96J42 360 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 LYSMD1Q96S90 227 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 EPYCQ99645 322 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GABARAPL3Q9BY60 117 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GPR63Q9BZJ6 419 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 LRRN3Q9H3W5 708 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SYNDIG1Q9H7V2 258 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SIAEQ9HAT2 523 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ACOT13Q9NPJ3 140 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 DYRK4Q9NR20 520 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 INIPQ9NRY2 104 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 FAM120CQ9NX05 1096 aaKnown RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 TRNAU1APQ9NX07 287 aaKnown RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 KCTD5Q9NXV2 234 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 WWOXQ9NZC7 414 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 CCDC59Q9P031 241 aaKnown RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 SPASTQ9UBP0 616 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 LHX3Q9UBR4 397 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PISDQ9UG56 409 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF490Q9ULM2 529 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 ASB1Q9Y576 335 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 PCDHGB3Q9Y5G1 929 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 GMPPBQ9Y5P6 360 aa4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MAGED1Q9Y5V3 778 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-201ENST00000308987 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 IGLV3-16A0A075B6K0 115 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KCNE1BA0A087WTH5 132 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 A0A1W2PQ67 120 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PABPN1LA6NDY0 278 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 TMEM202A6NGA9 273 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 METTL15A6NJ78 407 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PTGES3LE9PB15 166 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SCDO00767 359 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 AQP7O14520 342 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GAPDHSO14556 408 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 RFXANKO14593 260 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KPNA5O15131 536 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 TSPAN6O43657 245 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KDM1AO60341 852 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SNRNP200O75643 2136 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 UPK1BO75841 260 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SLC25A14O95258 325 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PGLSO95336 258 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PTTG1O95997 202 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 C9P02748 559 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 FTH1P02794 183 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 MT-ND2P03891 347 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 FABP3P05413 133 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ANXA8P13928 327 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 AGXTP21549 392 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SERPINB1P30740 379 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms