RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PLAG1Q6DJT9 500 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FOXJ1Q92949 421 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 LMF1Q96S06 567 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 C2orf42Q9NWW7 574 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 CSNK1G3Q9Y6M4 447 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 GRM7Q14831 915 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 SLC35F2Q8IXU6 374 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 FN3KQ9H479 309 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CPNE5Q9HCH3 593 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 AMY2AP04746 511 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CFL1P23528 166 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 AGTR1P30556 359 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 LCTLQ6UWM7 567 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 TCEAL8Q8IYN2 117 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 B3GNT7Q8NFL0 401 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 NTMT1Q9BV86 223 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 PRSS21Q9Y6M0 314 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MRPS14O60783 128 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 UPK1BO75841 260 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 NDUFB2O95178 105 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 NR4A2P43354 598 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 C6orf132Q5T0Z8 1188 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 RAB11FIP2Q7L804 512 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ASB15Q8WXK1 588 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 BMFQ96LC9 184 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 PINK1Q9BXM7 581 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CWH43Q9H720 699 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF35P13682 527 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MAGEA3P43357 314 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 PITPNBP48739 271 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 HMBOX1Q6NT76 420 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 EIF5A2Q9GZV4 153 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 HOXD1Q9GZZ0 328 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 OR51E2Q9H255 320 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 TCRBV3S1A0A5B6 114 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 BMPR1AP36894 532 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 DUS1LQ6P1R4 473 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CNTN4Q8IWV2 1026 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ELMOD2Q8IZ81 293 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF442Q9H7R0 627 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 GORASP2Q9H8Y8 452 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ARNTLO00327 626 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 GPR39O43194 453 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 APOC3P02656 99 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ACTBP60709 375 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ACTG1P63261 375 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ACVR1CQ8NER5 493 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ZMYND19Q96E35 227 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF285Q96NJ3 590 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 OR52A4PA6NMU1 304 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CD34P28906 385 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 DLX2Q07687 328 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MORN1Q5T089 497 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 CNIH2Q6PI25 160 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 PDZD3Q86UT5 571 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
PRKCB-201ENST00000303531 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-201ENST00000303531 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 SEMA4FO95754 770 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 DIO2Q92813 273 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
PRKCB-201ENST00000303531 TRAV18A0A075B6X5 111 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 SELENOVP59797 346 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 IGFN1Q86VF2 1251 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 CDRT4Q8N9R6 151 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 B4GALT7Q9UBV7 327 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ICKQ9UPZ9 632 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 TMPPEQ6ZT21 453 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ARL14Q8N4G2 192 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms