RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PCDHGB1Q9Y5G3 927 aa13.6□□□□□ -0.23
SMG8-201ENST00000300917 GABARAPO95166 117 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 ITGADQ13349 1161 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 SLC30A6Q6NXT4 461 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SIX5Q8N196 739 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 AMER2Q8N7J2 671 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SLC38A4Q969I6 547 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SDF2Q99470 211 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CNPPD1Q9BV87 410 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 PLGRKTQ9HBL7 147 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 KLHL28Q9NXS3 571 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 WWP2O00308 870 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CYR61O00622 381 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CD38P28907 300 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SSTR4P31391 388 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SOX3P41225 446 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 PSMD7P51665 324 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CCR5P51681 352 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 ZNF836Q6ZNA1 936 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 USP53Q70EK8 1073 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 PRSS58Q8IYP2 241 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 LRR1Q96L50 414 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 TRNT1Q96Q11 434 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 CACYBPQ9HB71 228 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 RHBDL2Q9NX52 303 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 SLC7A7Q9UM01 511 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 A8MU76 341 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 LRRTM2O43300 516 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CNOT3O75175 753 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 GPR75O95800 540 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 BLKP51451 505 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 PEX5LQ8IYB4 626 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 ZNF655Q8N720 491 aaPredicted RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 C19orf47Q8N9M1 422 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 MORN4Q8NDC4 146 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 OR52R1Q8NGF1 315 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 GRHL3Q8TE85 626 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 CNDP2Q96KP4 475 aaKnown RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 ZNF443Q9Y2A4 671 aaPredicted RBP13.59□□□□□ -0.23
SMG8-201ENST00000300917 ENTPD2Q9Y5L3 495 aa13.59□□□□□ -0.23
SMG8-201ENST00000300917 E9PQ18 207 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 GNSP15586 552 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 MAOAP21397 527 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 SMIM11AP58511 58 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ILKQ13418 452 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 PERM1Q5SV97 790 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 NACC2Q96BF6 587 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 TSSK6Q9BXA6 273 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ACAD8Q9UKU7 415 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 A8MUA0 341 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 THY1P04216 161 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 TP53P04637 393 aaPredicted RBP13.58□□□□□ -0.24
SMG8-201ENST00000300917 GIPRP48546 466 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 STX4Q12846 297 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 NR1D2Q14995 579 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ZNF628Q5EBL2 1059 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 DCST2Q5T1A1 773 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 OR8D4Q8NGM9 314 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 RELTQ969Z4 430 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.24
SMG8-201ENST00000300917 SIGLEC11Q96RL6 698 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 CENPOQ9BU64 300 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 MAT2BQ9NZL9 334 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 NDOR1Q9UHB4 597 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 KCNE5Q9UJ90 142 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 POMT2Q9UKY4 750 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ZNF232Q9UNY5 417 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 LIPT1Q9Y234 373 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 DUXAA6NLW8 204 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
SMG8-201ENST00000300917 ALOX5P09917 674 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ALAS2P22557 587 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 IDUAP35475 653 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 MRPL2Q5T653 305 aaKnown RBP13.58□□□□□ -0.24
SMG8-201ENST00000300917 SMARCD3Q6STE5 483 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 Q96MT0 163 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.24
SMG8-201ENST00000300917 DCSTAMPQ9H295 470 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 PMF1-BGLAPU3KQ54 211 aa13.58□□□□□ -0.24
SMG8-201ENST00000300917 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 OR5K4A6NMS3 321 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 IFNA16P05015 189 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 PROS1P07225 676 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 ZNF91Q05481 1191 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 ZNF267Q14586 743 aaPredicted RBP13.57□□□□□ -0.24
SMG8-201ENST00000300917 CEBPEQ15744 281 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 HSDL2Q6YN16 418 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 Q8N9G6 341 aaPredicted RBP13.57□□□□□ -0.24
SMG8-201ENST00000300917 TMEM203Q969S6 136 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 SLC41A3Q96GZ6 507 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 PLEKHA8Q96JA3 519 aa13.57□□□□□ -0.24
SMG8-201ENST00000300917 BTBD2Q9BX70 525 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms