RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TCRBV3S1A0A5B6 114 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 GLOD5A6NK44 160 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 CTNSO60931 367 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 HEXBP07686 556 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 ICAM2P13598 275 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 CPMP14384 443 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 PORP16435 677 aaPredicted RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 SOAT1P35610 550 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 XKP51811 444 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 HSPB3Q12988 150 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 GAB1Q13480 694 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 RGNQ15493 299 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 KRTCAP3Q53RY4 240 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 ZNF766Q5HY98 468 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 SAXO2Q658L1 398 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 MEX3BQ6ZN04 569 aaKnown RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 SPPL2CQ8IUH8 684 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 MICU2Q8IYU8 434 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 OR5T3Q8NGG3 340 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 THAP3Q8WTV1 239 aaPredicted RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 CSF3RQ99062 836 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 IKZF5Q9H5V7 419 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 CXorf36Q9H7Y0 433 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 SIRT3Q9NTG7 399 aaPredicted RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 C14orf105Q9NVL8 296 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 STMN3Q9NZ72 180 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 GMPR2Q9P2T1 348 aaKnown RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 TRPC4Q9UBN4 977 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 NKX1-2Q9UD57 310 aaPredicted RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 ERVK-11Q9UQG0 969 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 ZNF835Q9Y2P0 537 aa19.45■□□□□ 0.7
SMCO4-201ENST00000298966 ANKHD1Q8IWZ3 2542 aaKnown RBP19.45■□□□□ 0.7
SMCO4-201ENST00000298966 FAM227AF5H4B4 570 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 H0Y3Z8 333 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 PLOD2O00469 737 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ARPC2O15144 300 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ATP1B1P05026 303 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 FHP07954 510 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 BMP2P12643 396 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 CCT3P49368 545 aaKnown RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 GZMMP51124 257 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 SNRPNP63162 240 aaKnown RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 IGLV3-21P80748 117 aaPredicted RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 VEZF1Q14119 521 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 SERTAD2Q14140 314 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 CYP51A1Q16850 503 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 SPDYE7PQ495Y7 208 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 Q6ZPB1 254 aaPredicted RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ZNF551Q7Z340 670 aaPredicted RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 PACS2Q86VP3 889 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 IFNEQ86WN2 208 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 HIPK4Q8NE63 616 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 OR51Q1Q8NH59 317 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ZNF675Q8TD23 568 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 AURKBQ96GD4 344 aaPredicted RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 RSRC1Q96IZ7 334 aaKnown RBP19.44■□□□□ 0.7
SMCO4-201ENST00000298966 GPR137Q96N19 417 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ENKD1Q9H0I2 346 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 GORASP2Q9H8Y8 452 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 NTMQ9P121 344 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 ABCA2Q9BZC7 2435 aa19.44■□□□□ 0.7
SMCO4-201ENST00000298966 SCN2AQ99250 2005 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 A0A087WV62 115 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 GSTA4O15217 222 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 EMC8O43402 210 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 PRKRAO75569 313 aaKnown RBP19.43■□□□□ 0.7
SMCO4-201ENST00000298966 WISP2O76076 250 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 NADKO95544 446 aaPredicted RBP19.43■□□□□ 0.7
SMCO4-201ENST00000298966 SLC35E2P0CK97 266 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 UMPSP11172 480 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 GGT1P19440 569 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 EFNA1P20827 205 aaPredicted RBP19.43■□□□□ 0.7
SMCO4-201ENST00000298966 ATP6V1B2P21281 511 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 GALNSP34059 522 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 GCKP35557 465 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 OR4D2P58180 307 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 FOLH1Q04609 750 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 SLC34A1Q06495 639 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 SPATA24Q86W54 205 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 CCDC116Q8IYX3 515 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 METTL25Q8N6Q8 603 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 ZNF700Q9H0M5 742 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 TMEM38AQ9H6F2 299 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 MKKSQ9NPJ1 570 aaPredicted RBP19.43■□□□□ 0.7
SMCO4-201ENST00000298966 PRTFDC1Q9NRG1 225 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 HCN3Q9P1Z3 774 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 STOML1Q9UBI4 398 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 SNX8Q9Y5X2 465 aa19.43■□□□□ 0.7
SMCO4-201ENST00000298966 LOC102723996A0A087X1L8 192 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 H3BNX3 289 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 SOX30O94993 753 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 CYC1P08574 325 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 ANPEPP15144 967 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 FEN1P39748 380 aaKnown RBP19.42■□□□□ 0.7
SMCO4-201ENST00000298966 CDK9P50750 372 aaKnown RBP19.42■□□□□ 0.7
SMCO4-201ENST00000298966 ALDH6A1Q02252 535 aaKnown RBP19.42■□□□□ 0.7
SMCO4-201ENST00000298966 PCOLCEQ15113 449 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 C11orf65Q8NCR3 313 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 PYDC1Q8WXC3 89 aa19.42■□□□□ 0.7
SMCO4-201ENST00000298966 UCN3Q969E3 161 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms