RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CABIN1Q9Y6J0 2220 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 FOLR1P15328 257 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 IL7RP16871 459 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 BTG2P78543 158 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF155Q12901 538 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-202ENST00000297979 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
C9orf3-202ENST00000297979 DCST2Q5T1A1 773 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 GUSBP11Q6P575 273 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 DHRS4L2Q6PKH6 230 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 COX18Q8N8Q8 333 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 TMEM105Q8N8V8 129 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 OR6T1Q8NGN1 323 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 OR52P1PQ8NH57 321 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 DGAT2Q96PD7 388 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 SDF2Q99470 211 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 PITX2Q99697 317 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 ARHGDIGQ99819 225 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 APOL4Q9BPW4 351 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 NIPSNAP1Q9BPW8 284 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-202ENST00000297979 A4GNTQ9UNA3 340 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 HSPE1-MOB4S4R3N1 261 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 LY6G6EA0A0G2JKS1 128 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 CPED1A4D0V7 1026 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 UGT2B17O75795 530 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 HNRNPCP07910 306 aaKnown RBP eCLIP13.28□□□□□ -0.285e-8■■□□□ 13.5
C9orf3-202ENST00000297979 ELAVL4P26378 380 aaKnown RBP13.28□□□□□ -0.28
C9orf3-202ENST00000297979 MAP3K8P41279 467 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 IL5RAQ01344 420 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 MEP1AQ16819 746 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 C6orf141Q5SZD1 244 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 GPR151Q8TDV0 419 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 ADNPQ9H2P0 1102 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 FBXO4Q9UKT5 387 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 CLDN16Q9Y5I7 305 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 U3KQA8 63 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 ADAMTS20P59510 1910 aa13.28□□□□□ -0.28
C9orf3-202ENST00000297979 SMIM31A0A1B0GVY4 71 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 M0R296 226 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 FAAHO00519 579 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 AK1P00568 194 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 MAOAP21397 527 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 CBLP22681 906 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 LAMA1P25391 3075 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 EPHA2P29317 976 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 STT3AP46977 705 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 HLCSP50747 726 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 DUSP8Q13202 625 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 DCST1Q5T197 706 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 CCNJQ5T5M9 372 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 FAM181AQ8N9Y4 354 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 DTWD2Q8NBA8 298 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 AQP11Q8NBQ7 271 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 PIK3R3Q92569 461 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 HOXB13Q92826 284 aaPredicted RBP13.27□□□□□ -0.28
C9orf3-202ENST00000297979 PRRC1Q96M27 445 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 OCEL1Q9H607 264 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 NDUFA13Q9P0J0 144 aa13.27□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF443Q9Y2A4 671 aaPredicted RBP13.27□□□□□ -0.28
C9orf3-202ENST00000297979 E9PQ18 207 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 TOX3O15405 576 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-202ENST00000297979 STX11O75558 287 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 OXSR1O95747 527 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-202ENST00000297979 S1PR1P21453 382 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 ALAS2P22557 587 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 GNALP38405 381 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 GCGRP47871 477 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 RPP38P78345 283 aaKnown RBP13.27□□□□□ -0.29
C9orf3-202ENST00000297979 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF770Q6IQ21 691 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-202ENST00000297979 TMEM71Q6P5X7 295 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 RABEPKQ7Z6M1 372 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 FNDC11Q9BVV2 318 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 KLHL28Q9NXS3 571 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 SERTAD3Q9UJW9 196 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 ASXL3Q9C0F0 2248 aa13.27□□□□□ -0.29
C9orf3-202ENST00000297979 SOX30O94993 753 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 POU6F2P78424 691 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 TOP3AQ13472 1001 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 SQSTM1Q13501 440 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 SERTAD2Q14140 314 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 NPTX1Q15818 432 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 PERM1Q5SV97 790 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 TSPYL5Q86VY4 417 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF619Q8N2I2 560 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 HRASLS5Q96KN8 279 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 PELOQ9BRX2 385 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 FANCEQ9HB96 536 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms