RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ZNF551Q7Z340 670 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 C17orf47Q8NEP4 570 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 OR2M7Q8NG81 312 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 SLC26A7Q8TE54 656 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CIDECQ96AQ7 238 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 HSPBAP1Q96EW2 488 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 FAM173AQ9BQD7 235 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 DEPPQ9NTK1 212 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 EML6Q6ZMW3 1958 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TFECO14948 347 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ASNA1O43681 348 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TBX19O60806 448 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 SLITRK5O94991 958 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 C8BP07358 591 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 DRD5P21918 477 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ABCD3P28288 659 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ADSLP30566 484 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PIGAP37287 484 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 MC3RP41968 323 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ALDH3B2P48448 385 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 FBXW4P57775 412 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 RBPJQ06330 500 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 HSPB3Q12988 150 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 NTRK2Q16620 822 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CPTPQ5TA50 214 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PRAMEF20Q5VT98 475 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 LPCAT4Q643R3 524 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 METTL25Q8N6Q8 603 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 OR10G3Q8NGC4 313 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PAQR8Q8TEZ7 354 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PYDC1Q8WXC3 89 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 DIO2Q92813 273 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ELP4Q96EB1 424 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ZBED6CLQ96FA7 236 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 FOLH1BQ9HBA9 442 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 DDX18Q9NVP1 670 aaKnown RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CNIH4Q9P003 139 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TENM4Q6N022 2769 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 A0A087WV62 115 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 PINLYPA6NC86 204 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 PLOD2O00469 737 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 SCAMP2O15127 329 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 HS6ST1O60243 411 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 ERN1O75460 977 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 G6PDP11413 515 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF23P17027 643 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 LBPP18428 481 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 CDH2P19022 906 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 EFNA1P20827 205 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 PRPS1L1P21108 318 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 NUP107P57740 925 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 CBX3Q13185 183 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 PDE7AQ13946 482 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 GK5Q6ZS86 529 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 FAM26EQ8N5C1 309 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 KRTCAP2Q8N6L1 136 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 OR7A2PQ8NGA2 310 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF764Q96H86 408 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 GPR137Q96N19 417 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 RILPQ96NA2 401 aa11.11□□□□□ -0.63
HMGB2-201ENST00000296503 C19orf53Q9UNZ5 99 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 SPENQ96T58 3664 aaKnown RBP11.11□□□□□ -0.63
HMGB2-201ENST00000296503 A0A0G2JMM0 328 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 A0A1W2PPB8 328 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TRPC5OSA6NMA1 111 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 KIR3DP1A8MWS1 328 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SLCO1B7G3V0H7 640 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ACOT7O00154 380 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 UPK1AO00322 258 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ACOX3O15254 700 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 HDAC3O15379 428 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 CDC40O60508 579 aaKnown RBP eCLIP11.1□□□□□ -0.632e-12■□□□□ 9
HMGB2-201ENST00000296503 REM1O75628 298 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PPM1BO75688 479 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 AGFG2O95081 481 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 LAMP1P11279 417 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NAGAP17050 411 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 KRT20P35900 424 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PRKAG1P54619 331 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 RPS6KA2Q15349 733 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NUP54Q7Z3B4 507 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms