RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 NARSO43776 548 aaKnown RBP16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 OR12D1P0DN82 309 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 HMGCLP35914 325 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 CAMLGP49069 296 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 LRIF1Q5T3J3 769 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 HES5Q5TA89 166 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 KCTD20Q7Z5Y7 419 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM163Q8TC26 289 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 KLK6Q92876 244 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 ECHDC3Q96DC8 303 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 SERINC1Q9NRX5 453 aa16.6■□□□□ 0.25
PCDHA13-201ENST00000289272 A0A1W2PPL8 197 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 MYADML2A6NDP7 307 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 MUSKO15146 869 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 CSTBP04080 98 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 FRMPD2BQ6IN97 320 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 Q6ZVL8 140 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 ALG8Q9BVK2 526 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 GABARAPL1Q9H0R8 117 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 POU6F2P78424 691 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 CLPPQ16740 277 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 LRRC26Q2I0M4 334 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 GAREM2Q75VX8 874 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 SCGB1C1Q8TD33 95 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 PRRT1Q99946 306 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 G6PC3Q9BUM1 346 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 hCG_1807616A0A1W2PRN6 198 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 OR5K4A6NMS3 321 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 PIPP12273 146 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 ETFAP13804 333 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 SOX3P41225 446 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 MTNR1BP49286 362 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 ZNF789Q5FWF6 425 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC8B1Q6J4K2 584 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 MAVSQ7Z434 540 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 HIST1H2AAQ96QV6 131 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 SULT4A1Q9BR01 284 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 CTDSP2O14595 271 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 DEFA6Q01524 100 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 CDNFQ49AH0 187 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 HBMQ6B0K9 141 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 LETMD1Q6P1Q0 360 aa16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 FAM83HQ6ZRV2 1179 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-201ENST00000289272 SCDO00767 359 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 SPDEFO95238 335 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 SYPP08247 313 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 PREPP48147 710 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 BAK1Q16611 211 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 PROKR1Q8TCW9 393 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM19Q96HH6 336 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 CPPED1Q9BRF8 314 aaPredicted RBP16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 ORAI3Q9BRQ5 295 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 C8orf33Q9H7E9 229 aaPredicted RBP16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 GFOD1Q9NXC2 390 aa16.58■□□□□ 0.25
PCDHA13-201ENST00000289272 H3BUI4 141 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 TP53P04637 393 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CASRP41180 1078 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 DHPSP49366 369 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 LMAN2Q12907 356 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CBFBQ13951 182 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CHRFAM7AQ494W8 412 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 LRRC37A5PQ49AS3 106 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 LSMEM2Q8N112 164 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CBARPQ8N350 705 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 RAB8BQ92930 207 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 PITHD1Q9GZP4 211 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 BTAF1O14981 1849 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 ALDOCP09972 364 aaKnown RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CSF2RAP15509 400 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 AHCYP23526 432 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 HTR6P50406 440 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 DOC2AQ14183 400 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 UBE2NLQ5JXB2 153 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 OR52P1PQ8NH57 321 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 SMARCD2Q92925 531 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 GAL3ST4Q96RP7 486 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 PLCXD1Q9NUJ7 323 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 ARPC1BO15143 372 aaKnown RBP16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 VEGFDO43915 354 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 HPGDSO60760 199 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 HOXC8P31273 242 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 ADPRMQ3LIE5 342 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 CLVS2Q5SYC1 327 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 AKR1C8PQ5T2L2 129 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 AVPI1Q5T686 147 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 ALG1LQ6GMV1 187 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 TRIM46Q7Z4K8 759 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 C3orf49Q96BT1 292 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 ATOH8Q96SQ7 321 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 AKIP1Q9NQ31 210 aa16.58■□□□□ 0.24
PCDHA13-201ENST00000289272 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 LOC102723532A0A0G2JNH3 316 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ANHXE9PGG2 379 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 CAPNS1P04632 268 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 CYP17A1P05093 508 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms