RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 COQ7Q99807 217 aa12.41□□□□□ -0.42
SLC28A1-201ENST00000286749 LGR4Q9BXB1 951 aa12.41□□□□□ -0.42
SLC28A1-201ENST00000286749 XKR8Q9H6D3 395 aa12.41□□□□□ -0.42
SLC28A1-201ENST00000286749 C11orf49Q9H6J7 331 aa12.41□□□□□ -0.42
SLC28A1-201ENST00000286749 CSNK1G3Q9Y6M4 447 aa12.41□□□□□ -0.42
SLC28A1-201ENST00000286749 MDC1Q14676 2089 aaKnown RBP12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A1W2PR48 441 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 SGK494L7N484 410 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 SOCS6O14544 535 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CHST10O43529 356 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 PIP5K1CO60331 668 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 PLOD3O60568 738 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 SLC43A1O75387 559 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CLEC3AO75596 197 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 PCCBP05166 539 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 ELK1P19419 428 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.425e-7■■■■□ 19.4
SLC28A1-201ENST00000286749 EVI2BP34910 448 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 HSD17B2P37059 387 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CLCNKAP51800 687 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 ST3GAL3Q11203 375 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 RIN1Q13671 783 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 EOGTQ5NDL2 527 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 TRILQ7L0X0 811 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 LRRTM4Q86VH4 590 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 OR4M2Q8NGB6 313 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 DNAJA4Q8WW22 397 aaPredicted RBP12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 OSTF1Q92882 214 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CHFRQ96EP1 664 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 CHST2Q9Y4C5 530 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
SLC28A1-201ENST00000286749 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 IGHA1P01876 353 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 NOGQ13253 232 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ADAM15Q13444 863 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 LRRC32Q14392 662 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC9A5Q14940 896 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 IDNKQ5T6J7 187 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 METRNLQ641Q3 311 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 BHLHB9Q6PI77 547 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC39A5Q6ZMH5 540 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ERN2Q76MJ5 926 aaKnown RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 NR2C2APQ86WQ0 139 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 DTX3Q8N9I9 347 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 TMIEQ8NEW7 156 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 SFXN5Q8TD22 340 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 OTUB2Q96DC9 234 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 COX14Q96I36 57 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ART5Q96L15 291 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 HDHD2Q9H0R4 259 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 ADAM30Q9UKF2 790 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 POLHQ9Y253 713 aa12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 EXOGQ9Y2C4 368 aaKnown RBP12.4□□□□□ -0.43
SLC28A1-201ENST00000286749 TRPM6Q9BX84 2022 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FAM183AA6NL82 134 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SYT5O00445 386 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ERI3O43414 337 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 HRO43593 1189 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 OR2B3O76000 313 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC35G4P0C7Q5 338 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ERVFC1P60507 584 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PGGHGQ32M88 737 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ZNF322Q6U7Q0 402 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 NRMQ8IXM6 262 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SIRT6Q8N6T7 355 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC37A3Q8NCC5 494 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 OR56A1Q8NGH5 318 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 OR52N1Q8NH53 320 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 CXorf40AQ8TE69 158 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TRPV5Q9NQA5 729 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 CBLCQ9ULV8 474 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 HSPB11Q9Y547 144 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 CDH10Q9Y6N8 788 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC19A2O60779 497 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 EFCAB14O75071 495 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 GAAP10253 952 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 CFL1P23528 166 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FPR3P25089 353 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 HTR1FP30939 366 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 BCL6P41182 706 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 MC3RP41968 323 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TGM3Q08188 693 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms