RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 IL17CQ9P0M4 197 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 GMPR2Q9P2T1 348 aaKnown RBP15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 FRS3O43559 492 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 GPR37L1O60883 481 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 EDN1P05305 212 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 ALDOCP09972 364 aaKnown RBP15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 CD70P32970 193 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 NUDT1P36639 197 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 GPR143P51810 404 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 SLX4IPQ5VYV7 408 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 FAM205BPQ63HN1 556 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 LMX1AQ8TE12 382 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 CNTNAP3BQ96NU0 1288 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 OR2M4Q96R27 311 aa15.6■□□□□ 0.09
SH3RF1-201ENST00000284637 TXNL1O43396 289 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 IFNA17P01571 189 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SCD5Q86SK9 330 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC9B2Q86UD5 537 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 C12orf45Q8N5I9 185 aaPredicted RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TRIB2Q92519 343 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC7A6Q92536 515 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RAD9AQ99638 391 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 PRODH2Q9UF12 536 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 LOC102723532A0A0G2JNH3 316 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 A6NIN4 97 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 GNRHRP30968 328 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 LSSP48449 732 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RNASE10Q5GAN6 216 aaKnown RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RASGRP3Q8IV61 690 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 KLHDC8AQ8IYD2 350 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 OR2M2Q96R28 347 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RDH14Q9HBH5 336 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 KLHL9Q9P2J3 617 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SDK1Q7Z5N4 2213 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 A0A1B0GV50 99 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 PRSS44E7EML9 344 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 LCMT2O60294 686 aaKnown RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SC5DO75845 299 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TRAPPC6AO75865 159 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 AMY2AP04746 511 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 PITPNBP48739 271 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 CLRN1P58418 232 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RRAS2P62070 204 aaPredicted RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 VEZF1Q14119 521 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 GRHL2Q6ISB3 625 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 MAMDC4Q6UXC1 1216 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SVBPQ8N300 66 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 BEST4Q8NFU0 473 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 GPR150Q8NGU9 434 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC41A3Q96GZ6 507 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 CCDC86Q9H6F5 360 aaKnown RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 THSD1Q9NS62 852 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 H7C417 338 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 GPR39O43194 453 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RAB3AP20336 220 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 ZNF616Q08AN1 781 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TMEM205Q6UW68 189 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 B3GNT9Q6UX72 402 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 DEFB119Q8N690 84 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 MDGA1Q8NFP4 955 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC22A8Q8TCC7 542 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 RBPMSQ93062 196 aaKnown RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 LMF1Q96S06 567 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TREX1Q9NSU2 369 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 USP22Q9UPT9 525 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TRAV18A0A075B6X5 111 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 VEGFDO43915 354 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 PLEKHN1Q494U1 663 aaPredicted RBP15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 ALG10BQ5I7T1 473 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 CPZQ66K79 652 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 CHST14Q8NCH0 376 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 EGLN2Q96KS0 407 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 ACPTQ9BZG2 426 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 DPH1Q9BZG8 443 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 GORASP2Q9H8Y8 452 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 MYNNQ9NPC7 610 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 TLR9Q9NR96 1032 aa15.59■□□□□ 0.09
SH3RF1-201ENST00000284637 SNAPINO95295 136 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 ADRB3P13945 408 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 RACK1P63244 317 aaKnown RBP15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 SGCAQ16586 387 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 LRIG1Q96JA1 1093 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 ZNF649Q9BS31 505 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 ALG8Q9BVK2 526 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 ARHGAP39Q9C0H5 1083 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 KLF15Q9UIH9 416 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 BTNL2Q9UIR0 455 aa15.58■□□□□ 0.09
SH3RF1-201ENST00000284637 SIGLEC1Q9BZZ2 1709 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 IGLON5A6NGN9 336 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 FAM171A2A8MVW0 826 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 ARNTLO00327 626 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 AMY2BP19961 511 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 PTPN6P29350 595 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 DPP6P42658 865 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF33BQ06732 778 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 THAP3Q8WTV1 239 aaPredicted RBP15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 CPNE2Q96FN4 548 aaPredicted RBP15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 AK6Q9Y3D8 172 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms