RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 OR5K3A6NET4 321 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 C17orf100A8MU93 164 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 HEPACAM2A8MVW5 462 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ARHGEF33A8MVX0 844 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 GAPDHSO14556 408 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 LPXNO60711 386 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NDUFS7O75251 213 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ZCCHC18P0CG32 403 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TIA1P31483 386 aaKnown RBP eCLIP2.52□□□□□ -2.013e-6■■■■□ 25.3
CHD1-201ENST00000284049 PTGER4P35408 488 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NPY2RP49146 381 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CXCR3P49682 368 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CLDN8P56748 225 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MSLNQ13421 630 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 CNPY1Q3B7I2 92 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 EPC2Q52LR7 807 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RAD9BQ6WBX8 426 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TMPRSS9Q7Z410 1059 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ST13P4Q8IZP2 240 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 MCPH1Q8NEM0 835 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 OR13F1Q8NGS4 319 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CNIH3Q8TBE1 160 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CD300LFQ8TDQ1 290 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NT5C3BQ969T7 300 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TMEM19Q96HH6 336 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RAB40CQ96S21 281 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RASL10BQ96S79 203 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RTP3Q9BQQ7 232 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TDRD3Q9H7E2 651 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 PANK3Q9H999 370 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 GHRLQ9UBU3 117 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ABCC12Q96J65 1359 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TRAV26-1A0A087WT03 109 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 A0A1W2PQ72 361 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TMEM120BA0PK00 339 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CD8B2A6NJW9 211 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 H0YHG0 523 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 EI24O14681 340 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CYTH3O43739 400 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 POP4O95707 220 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 CYLC1P35663 651 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 MPLP40238 635 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 HTR2BP41595 481 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CRYBB1P53674 252 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 STX17P56962 302 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 BEAN1Q3B7T3 259 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 HSDL2Q6YN16 418 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CHMP1BQ7LBR1 199 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NET1Q7Z628 596 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 OR4A15Q8NGL6 344 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 LENG9Q96B70 501 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 APH1AQ96BI3 265 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TGM7Q96PF1 710 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CCT8L2Q96SF2 557 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NPY6RQ99463 290 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 BEX2Q9BXY8 128 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 WWTR1Q9GZV5 400 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SLC26A1Q9H2B4 701 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PPIL3Q9H2H8 161 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 RNF41Q9H4P4 317 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 LY9Q9HBG7 655 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MOV10Q9HCE1 1003 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 ASB6Q9NWX5 421 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 C1RLQ9NZP8 487 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MYH3P11055 1940 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 A0A1B0GW15 77 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FAM90A26D6RGX4 464 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PDXKO00764 312 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SH2D1BO14796 132 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PRKRAO75569 313 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 ZFPL1O95159 310 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PLA2G16P53816 162 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ISL1P61371 349 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ERVK-25P63136 954 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 INSM1Q01101 510 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 MFAP5Q13361 173 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RCAN2Q14206 197 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ABHD17BQ5VST6 288 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FNDC7Q5VTL7 733 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FAM166AQ6J272 317 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CBLN3Q6UW01 205 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ZNF554Q86TJ5 538 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 OR7A2PQ8NGA2 310 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RAB3IL1Q8TBN0 382 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 DVL3Q92997 716 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 LHX4Q969G2 390 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 APOLD1Q96LR9 279 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NKX3-1Q99801 234 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 MACROD1Q9BQ69 325 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TRMOQ9BU70 441 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PINK1Q9BXM7 581 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SAV1Q9H4B6 383 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 PNPLA3Q9NST1 481 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 ADA2Q9NZK5 511 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 GNG12Q9UBI6 72 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 IL36AQ9UHA7 158 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 IKZF3Q9UKT9 509 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MYO6Q9UM54 1294 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CUL9Q8IWT3 2517 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 COL2A1P02458 1487 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms