RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 LRFN4Q6PJG9 635 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NUP43Q8NFH3 380 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SLC45A3Q96JT2 553 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 IL21RQ9HBE5 538 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MRPL15Q9P015 296 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 PLSCR5A0PG75 271 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LRP5LA4QPB2 252 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SOCS5O75159 536 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MTNR1AP48039 350 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 PRPS1P60891 318 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 IL17AQ16552 155 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ASRGL1Q7L266 308 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF439Q8NDP4 499 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR56B4Q8NH76 319 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZBED3Q96IU2 234 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SLC6A14Q9UN76 642 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LOC102725191A0A1B0GVB3 256 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR5K4A6NMS3 321 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TK1P04183 234 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LEG1Q6P5S2 330 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM107Q6UX40 140 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CPNE5Q9HCH3 593 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 KLHL42Q9P2K6 505 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NOCTQ9UK39 431 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LOC105369274A0A096LPK9 316 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LYRM1O43325 122 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MTX2O75431 263 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SNAP29O95721 258 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CKMT1AP12532 417 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TYRP1P17643 537 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RPS21P63220 83 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 STEAP4Q687X5 459 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TTLL10Q6ZVT0 673 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NLRP8Q86W28 1048 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZFAND4Q86XD8 727 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR4N4Q8N0Y3 316 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MGLLQ99685 303 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NMNAT2Q9BZQ4 307 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TSPAN11A1L157 253 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ETV6P41212 452 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SGSHP51688 502 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 DEFB115Q30KQ5 88 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 PRSS55Q6UWB4 352 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 OR13J1Q8NGT2 312 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 FOXRED1Q96CU9 486 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CNTNAP3Q9BZ76 1288 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MFFQ9GZY8 342 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TESQ9UGI8 421 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SCML2Q9UQR0 700 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 K7EQM0 130 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 GBAP04062 536 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 HBQ1P09105 142 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CD53P19397 219 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MRPS10P82664 201 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 GLO1Q04760 184 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF33AQ06730 810 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CNN3Q15417 329 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 PRSS48Q7RTY5 328 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TSSK2Q96PF2 358 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 HRASLS2Q9NWW9 162 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 PCDHGA5Q9Y5G8 931 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ANKRD30BLA7E2S9 258 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 OLFM2O95897 454 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RAB6AP20340 208 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 GPR4P46093 362 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RCAN2Q14206 197 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CNIH2Q6PI25 160 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TPRG1Q6ZUI0 275 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 FRS2Q8WU20 508 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TRUB1Q8WWH5 349 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 FAM46AQ96IP4 442 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SPTBP11277 2137 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 LOC730098B7Z3J9 87 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 JRKO75564 520 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MMP2P08253 660 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A6P0DMU7 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A5P0DMU8 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A7P0DMV0 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A8P0DMV1 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A9P0DMV2 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 HNRNPFP52597 415 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A2Q5DJT8 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A1Q5HYN5 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 OR9I1Q8NGQ6 314 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CT45A3Q8NHU0 189 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SYNPO2LQ9H987 977 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SYPP08247 313 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RBMS1P29558 406 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CRYZQ08257 329 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms