RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CAPZBP47756 277 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 SMIM11AP58511 58 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 PRICKLE2Q7Z3G6 844 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 SAMD14Q8IZD0 417 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-201ENST00000279247 ANKRD9Q96BM1 317 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-201ENST00000279247 BTBD2Q9BX70 525 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF443Q9Y2A4 671 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-201ENST00000279247 A0A1W2PRQ8 180 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 PTHP01270 115 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ADRA2AP08913 450 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 MED22Q15528 200 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 DCST2Q5T1A1 773 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF836Q6ZNA1 936 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 P2RY8Q86VZ1 359 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 PRSS58Q8IYP2 241 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 TANKQ92844 425 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 SLC38A4Q969I6 547 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 AHCYL2Q96HN2 611 aaKnown RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 CLN6Q9NWW5 311 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ENPP5Q9UJA9 477 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 LOC100506127A0A0U1RQW1 187 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF701M0R085 212 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 PIP5K1CO60331 668 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 GABRB1P18505 474 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 LIPAP38571 399 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 OR1D5P58170 312 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 GINS1Q14691 196 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 SOWAHCQ53LP3 525 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 KLHL35Q6PF15 583 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 IPCEF1Q8WWN9 437 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 GAB3Q8WWW8 586 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 MYDGFQ969H8 173 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 OTULINQ96BN8 352 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 RBM18Q96H35 190 aaKnown RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 SPRTNQ9H040 489 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 CALML5Q9NZT1 146 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ACAD8Q9UKU7 415 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF232Q9UNY5 417 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 C19orf53Q9UNZ5 99 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 IFNA16P05015 189 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 CKMT1AP12532 417 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF267Q14586 743 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-201ENST00000279247 CTF1Q16619 201 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 PRICKLE4Q2TBC4 344 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 VWA5B2Q8N398 1253 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 TMEM255BQ8WV15 326 aa16.72■□□□□ 0.27
CAPN1-201ENST00000279247 TGFBR3LH3BV60 316 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 ACSM5Q6NUN0 579 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 TMEM9Q9P0T7 183 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 PTGFRNQ9P2B2 879 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 LRIT1Q9P2V4 623 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 SLC7A7Q9UM01 511 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 A0A1B0GVT2 93 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 J3QRK9 145 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 M0R3G1 203 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 ASNA1O43681 348 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 CDK1P06493 297 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 FUT1P19526 365 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 C21orf59P57076 290 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 LARS2Q15031 903 aaKnown RBP16.71■□□□□ 0.27
CAPN1-201ENST00000279247 TIGD6Q17RP2 521 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 NRMQ8IXM6 262 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 MTHFD2LQ9H903 347 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-201ENST00000279247 WNT16Q9UBV4 365 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 DTX4Q9Y2E6 619 aa16.71■□□□□ 0.27
CAPN1-201ENST00000279247 TMEM184BQ9Y519 407 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-201ENST00000279247 A8MUA0 341 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 FOXS1O43638 330 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 PRKYO43930 277 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 OXSR1O95747 527 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 RAB38P57729 211 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 HNRNPKP61978 463 aaKnown RBP eCLIP16.7■□□□□ 0.268e-6■■■■□ 20.7
CAPN1-201ENST00000279247 ANKDD1AQ495B1 522 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 MRPL2Q5T653 305 aaKnown RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 MORN4Q8NDC4 146 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 WDR36Q8NI36 951 aaKnown RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 ALOXE3Q9BYJ1 711 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 TIMMDC1Q9NPL8 285 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 ENOPH1Q9UHY7 261 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 KCNE5Q9UJ90 142 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 HYKKA2RU49 373 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 STX11O75558 287 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 ATP1B1P05026 303 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 OR1D4P47884 311 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 STARD6P59095 220 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 ILKQ13418 452 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 SNAPC1Q16533 368 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 ZNF675Q8TD23 568 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 DHRS1Q96LJ7 313 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 OR5M11Q96RB7 305 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 PIGUQ9H490 435 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 RNF167Q9H6Y7 350 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 FSCN3Q9NQT6 498 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 E9PQ18 207 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 GNB5O14775 395 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 FASLGP48023 281 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 CLK1P49759 484 aaKnown RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 TTLL10Q6ZVT0 673 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 TBC1D15Q8TC07 691 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms