RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 RAET1LQ5VY80 246 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 TMEM107Q6UX40 140 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 LCA5Q86VQ0 697 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 UBQLNLQ8IYU4 475 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 CDC26Q8NHZ8 85 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 ZNF592Q92610 1267 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 RTN4RQ9BZR6 473 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 SIRT5Q9NXA8 310 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 NFU1Q9UMS0 254 aa13.79□□□□□ -0.2
SOD1-201ENST00000270142 A0A087WV62 115 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SLC22A20A6NK97 555 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 UBFD1O14562 309 aaKnown RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 MSTNO14793 375 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 CASKO14936 926 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SIAH2O43255 324 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 RIPK2O43353 540 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.29e-11■□□□□ 10
SOD1-201ENST00000270142 HK1P19367 917 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 GSTM5P46439 218 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SUCLG1P53597 346 aaKnown RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 MRPS22P82650 360 aaKnown RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 ZNF763Q0D2J5 394 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 STX5Q13190 355 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 CHMP1BQ7LBR1 199 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 CNEP1R1Q8N9A8 125 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 OR5M1Q8NGP8 315 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 FIG4Q92562 907 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SMR3AQ99954 134 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 SHCBP1LQ9BZQ2 653 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 GLIPR2Q9H4G4 154 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 NEUROD4Q9HD90 331 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 MID1IP1Q9NPA3 183 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 BEX4Q9NWD9 120 aaPredicted RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 MED11Q9P086 117 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 C6orf203Q9P0P8 240 aaPredicted RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
SOD1-201ENST00000270142 MED12LQ86YW9 2145 aa13.78□□□□□ -0.2
SOD1-201ENST00000270142 CCDC151A5D8V7 595 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 UPK1AO00322 258 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 SEC14L5O43304 696 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 FADS1O60427 444 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 PSMG1O95456 288 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 CRHP06850 196 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 PYGBP11216 843 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 KIR2DL2P43627 348 aaPredicted RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 GANABQ14697 944 aaKnown RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 CYP27C1Q4G0S4 372 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 ZNF474Q6S9Z5 364 aaPredicted RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 BTLAQ7Z6A9 289 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 CXorf67Q86X51 503 aaPredicted RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 MEIOBQ8N635 442 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.77□□□□□ -0.211e-33■□□□□ 8.3
SOD1-201ENST00000270142 MZB1Q8WU39 189 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 OPN3Q9H1Y3 402 aaPredicted RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 MIEF1Q9NQG6 463 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 ABCG2Q9UNQ0 655 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 C19orf53Q9UNZ5 99 aaPredicted RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 EIF3LQ9Y262 564 aaKnown RBP13.77□□□□□ -0.21
SOD1-201ENST00000270142 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
SOD1-201ENST00000270142 ACANP16112 2415 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 OR2M5A3KFT3 312 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 H3BML4 177 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
SOD1-201ENST00000270142 SLITRK5O94991 958 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 GSTA1P08263 222 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 NTSP30990 170 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 CCKARP32238 428 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 CD79BP40259 229 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 SIRPAP78324 504 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 IMPG1Q17R60 797 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
SOD1-201ENST00000270142 BIVMQ86UB2 503 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 OR2L13Q8N349 312 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 CCNYL1Q8N7R7 359 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 PGM2Q96G03 612 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 C18orf12Q96KH6 178 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 WFIKKN1Q96NZ8 548 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 FAM111AQ96PZ2 611 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 PINK1Q9BXM7 581 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 Q9N2J8 555 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 MYNNQ9NPC7 610 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 DDX18Q9NVP1 670 aaKnown RBP13.76□□□□□ -0.21
SOD1-201ENST00000270142 KLHL28Q9NXS3 571 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 PSMC3IPQ9P2W1 217 aaPredicted RBP13.76□□□□□ -0.21
SOD1-201ENST00000270142 DNHD1Q96M86 4753 aa13.76□□□□□ -0.21
SOD1-201ENST00000270142 DEFB108AA8MXU0 73 aa13.75□□□□□ -0.21
SOD1-201ENST00000270142 G3V2L1 256 aa13.75□□□□□ -0.21
SOD1-201ENST00000270142 TNFRSF21O75509 655 aa13.75□□□□□ -0.21
SOD1-201ENST00000270142 IL33O95760 270 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms