RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CYTIPO60759 359 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 CPT2P23786 658 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 APOFQ13790 326 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 FAM110CQ1W6H9 321 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 LRRC73Q5JTD7 316 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 TMEM74Q96NL1 305 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 QRSL1Q9H0R6 528 aaKnown RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 FAM212BQ9NTI7 297 aaPredicted RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 NLE1Q9NVX2 485 aaPredicted RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 MEGF6O75095 1541 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 SOCS2O14508 198 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 KDELR3O43731 214 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 HTR3BO95264 441 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 IL13RA1P78552 427 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 KLK6Q92876 244 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 TBC1D20Q96BZ9 403 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 FOXRED1Q96CU9 486 aaPredicted RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 SH3YL1Q96HL8 342 aaPredicted RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 UHRF2Q96PU4 802 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 TESQ9UGI8 421 aaKnown RBP11.52□□□□□ -0.57
SRRM4-201ENST00000267260 RNF11Q9Y3C5 154 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.57
SRRM4-201ENST00000267260 HLA-HP01893 362 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DRD5P21918 477 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 STC1P52823 247 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DUSP7Q16829 419 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 OR13C4Q8NGS5 318 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 NANPQ8TBE9 248 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SGCZQ96LD1 299 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 TDRD6O60522 2096 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 POP7O75817 140 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 HBE1P02100 147 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 ADORA3P0DMS8 318 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DGKEP52429 567 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SF3B4Q15427 424 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 UBE2NLQ5JXB2 153 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 KREMEN2Q8NCW0 462 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PAPD5Q8NDF8 572 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SETD7Q8WTS6 366 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 LRR1Q96L50 414 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 FBLP22087 321 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PYCR1P32322 319 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 GMPRP36959 345 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 TLE4Q04727 773 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CYP27C1Q4G0S4 372 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CST9LP1Q5W188 147 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 RBMS3Q6XE24 437 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SLC43A2Q8N370 569 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 OR56B4Q8NH76 319 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 GALPQ9UBC7 116 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 B3GNT3Q9Y2A9 372 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DCCP43146 1447 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 MYBPHLA2RUH7 354 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CPED1A4D0V7 1026 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 YJEFN3A6XGL0 299 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SLC1A7O00341 560 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DLX3O60479 287 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 GAREM2Q75VX8 874 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 NAA40Q86UY6 237 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 HORMAD2Q8N7B1 307 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CCDC74AQ96AQ1 378 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 SGTBQ96EQ0 304 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PINK1Q9BXM7 581 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PTTG3PQ9NZH4 202 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 KRBA1A5PL33 1030 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 OR5K4A6NMS3 321 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 TGM5O43548 720 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DFFBO76075 338 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CBLP22681 906 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 GJA5P36382 358 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 RAB28P51157 221 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 RELAQ04206 551 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 MAP4K2Q12851 820 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 DESI1Q6ICB0 168 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 BOLLQ8N9W6 283 aaKnown RBP11.51□□□□□ -0.57
SRRM4-201ENST00000267260 MICU1Q9BPX6 476 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 CLIC3O95833 236 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 UBL4AP11441 157 aa11.51□□□□□ -0.57
SRRM4-201ENST00000267260 NCBP2-AS2Q69YL0 99 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms