RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 RIN1Q13671 783 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 DECR1Q16698 335 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 CRTC2Q53ET0 693 aaPredicted RBP11.65□□□□□ -0.54
BEST3-201ENST00000266661 C6orf132Q5T0Z8 1188 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 VASNQ6EMK4 673 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 ZNF425Q6IV72 752 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 TMEM107Q6UX40 140 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 FAM131AQ6UXB0 335 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 SZRD1Q7Z422 152 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 FBXL6Q8N531 539 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 SLC7A6Q92536 515 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 SUSD6Q92537 303 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 SLC9A6Q92581 669 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 UFD1Q92890 307 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 CHFRQ96EP1 664 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 SLC22A4Q9H015 551 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 BTBD1Q9H0C5 482 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 MMP28Q9H239 520 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 ZDHHC4Q9NPG8 344 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 ZFR2Q9UPR6 939 aaKnown RBP11.65□□□□□ -0.54
BEST3-201ENST00000266661 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 OR1A2Q9Y585 309 aa11.65□□□□□ -0.54
BEST3-201ENST00000266661 CKAP5Q14008 2032 aa11.65□□□□□ -0.55
BEST3-201ENST00000266661 SHISA3A0PJX4 238 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 FRS3O43559 492 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 SERPIND1P05546 499 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 CHRM5P08912 532 aaPredicted RBP11.64□□□□□ -0.55
BEST3-201ENST00000266661 ACP5P13686 325 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 PRKAR1BP31321 381 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 SSTR4P31391 388 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 SOX18P35713 384 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 IFNGR2P38484 337 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 KIR2DL3P43628 341 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
BEST3-201ENST00000266661 ABATP80404 500 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 ENPP2Q13822 863 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 IRF4Q15306 451 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 TAB1Q15750 504 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 GPAT3Q53EU6 434 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 ZNF311Q5JNZ3 666 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 ADCK2Q7Z695 626 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 NKAIN4Q8IVV8 208 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 VWA5B2Q8N398 1253 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 RAB42Q8N4Z0 105 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 OR52E1Q8NGJ3 308 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 KLK6Q92876 244 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 C1GALT1C1Q96EU7 318 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 DIRAS2Q96HU8 199 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 RAB11FIP5Q9BXF6 653 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 MED17Q9NVC6 651 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 CNIH4Q9P003 139 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 SNX7Q9UNH6 387 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
BEST3-201ENST00000266661 SNTNA6NMZ2 147 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 MID1O15344 667 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 IDH3BO43837 385 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 GUCY1B2O75343 617 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 CEACAM5P06731 702 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 C8orf89P0DMQ9 161 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TAS2R41P59536 307 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ST3GAL3Q11203 375 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 EOGTQ5NDL2 527 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 PTCRAQ6ISU1 281 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 SHFQ7M4L6 423 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 PEX5LQ8IYB4 626 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 GJD3Q8N144 294 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 MFSD9Q8NBP5 474 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 NUP43Q8NFH3 380 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 OR2L3Q8NG85 312 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ACOT11Q8WXI4 607 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 SLC35A4Q96G79 324 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ZC3HAV1LQ96H79 300 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 SENP5Q96HI0 755 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 SLC38A2Q96QD8 506 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 COQ7Q99807 217 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ATF6BQ99941 703 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 RSPH9Q9H1X1 276 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 WDR26Q9H7D7 661 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ANKRA2Q9H9E1 313 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 MRPS30Q9NP92 439 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 DZANK1Q9NVP4 752 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 SPHK1Q9NYA1 384 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 SERGEFQ9UGK8 458 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ZNF232Q9UNY5 417 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 SLC17A4Q9Y2C5 497 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 NCOR1O75376 2440 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 LATO43561 262 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 FCMRO60667 390 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 RNGTTO60942 597 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 GNSP15586 552 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 FCARP24071 287 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 PTBP1P26599 531 aaKnown RBP eCLIP11.63□□□□□ -0.55
BEST3-201ENST00000266661 CERS1P27544 350 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 MC3RP41968 323 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 CAV3P56539 151 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 PPP3R1P63098 170 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms