RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 OR2G6Q5TZ20 316 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF551Q7Z340 670 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 OR9A1PQ8NGU1 263 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 S100A16Q96FQ6 103 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GAL3ST1Q99999 423 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 P2RY12Q9H244 342 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 DPEP2Q9H4A9 486 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PLCXD1Q9NUJ7 323 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEFF2Q9UIK5 374 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 CACNG2Q9Y698 323 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TEX51A0A1B0GUA7 166 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 RFXAPO00287 272 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 POLR1CO15160 346 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 NUPL2O15504 423 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 FABP7O15540 132 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GREM1O60565 184 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 UGDHO60701 494 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 CD160O95971 181 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 MRPL3P09001 348 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ACP5P13686 325 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ACVR1BP36896 505 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR68Q15743 365 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 FLYWCH1Q4VC44 716 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GRHL2Q6ISB3 625 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 OR52P1PQ8NH57 321 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 SMPDL3AQ92484 453 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 NR4A3Q92570 626 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TFGQ92734 400 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 CIDECQ96AQ7 238 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF419Q96HQ0 510 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 FNDC1Q4ZHG4 1894 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TRBV5-4A0A0C4DH59 114 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1W2PRQ8 180 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC16A8O95907 504 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 GASTP01350 101 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 IFNA6P05013 189 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TBPL1P62380 186 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM198BQ6UWH4 519 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 DCUN1D3Q8IWE4 304 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 OR8J2Q8NGG1 315 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 BBS10Q8TAM1 723 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 C16orf78Q8WTQ4 265 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TSEN15Q8WW01 171 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM83CQ9BQN1 747 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TTTY10Q9BZA0 68 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PPA2Q9H2U2 334 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ADAP2Q9NPF8 381 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 NDUFAF4Q9P032 175 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR34Q9UPC5 381 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PLCL2Q9UPR0 1127 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PCDHGA2Q9Y5H1 932 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FRMPD3Q5JV73 1810 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1B0GVC2 190 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1W2PP55 124 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 A6NIN4 97 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 OR2AT4A6NND4 320 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 CREBL2O60519 120 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 INHBBP09529 407 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ALPPL2P10696 532 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 AOAHP28039 575 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC19A1P41440 591 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 HBA1P69905 142 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PSPHP78330 225 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 RAB40BQ12829 278 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC30A6Q6NXT4 461 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 COMMD2Q86X83 199 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 OR10G6Q8NH81 332 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 CCDC107Q8WV48 283 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 KCNK12Q9HB15 430 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ZSCAN32Q9NX65 697 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 VNN3Q9NY84 501 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 GLOD5A6NK44 160 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 M0R3H8 397 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 CLEC2LP0C7M8 214 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 CLCNKAP51800 687 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ADAM8P78325 824 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC5A12Q1EHB4 618 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 METAP1DQ6UB28 335 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 UNC5DQ6UXZ4 953 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 GPALPP1Q8IXQ4 340 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 IL17RDQ8NFM7 739 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PCNPQ8WW12 178 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TANKQ92844 425 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FKBP10Q96AY3 582 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 GALNT9Q9HCQ5 603 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 THSD1Q9NS62 852 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 MRPL15Q9P015 296 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TSPAN11A1L157 253 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 HYKKA2RU49 373 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 RTCAO00442 366 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms