RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PRR20BP86481 221 aa8.83□□□□□ -1
VPS41-201ENST00000265745 PRR20AP86496 221 aa8.83□□□□□ -1
VPS41-201ENST00000265745 RCAN2Q14206 197 aa8.83□□□□□ -1
VPS41-201ENST00000265745 KIAA0040Q15053 153 aa8.83□□□□□ -1
VPS41-201ENST00000265745 IMPG1Q17R60 797 aa8.83□□□□□ -1
VPS41-201ENST00000265745 CYP27C1Q4G0S4 372 aa8.83□□□□□ -1
VPS41-201ENST00000265745 CFAP157Q5JU67 520 aa8.83□□□□□ -1
VPS41-201ENST00000265745 OR5M10Q6IEU7 315 aa8.83□□□□□ -1
VPS41-201ENST00000265745 NOXRED1Q6NXP6 359 aa8.83□□□□□ -1
VPS41-201ENST00000265745 ENPP6Q6UWR7 440 aa8.83□□□□□ -1
VPS41-201ENST00000265745 OR2L13Q8N349 312 aa8.83□□□□□ -1
VPS41-201ENST00000265745 C9orf106Q8NAJ2 232 aa8.83□□□□□ -1
VPS41-201ENST00000265745 RDH11Q8TC12 318 aa8.83□□□□□ -1
VPS41-201ENST00000265745 FAM222BQ8WU58 562 aa8.83□□□□□ -1
VPS41-201ENST00000265745 LRRC46Q96FV0 321 aa8.83□□□□□ -1
VPS41-201ENST00000265745 METTL2AQ96IZ6 378 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 TUBA1CQ9BQE3 449 aa8.83□□□□□ -1
VPS41-201ENST00000265745 G6PC3Q9BUM1 346 aa8.83□□□□□ -1
VPS41-201ENST00000265745 C12orf65Q9H3J6 166 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 PPCSQ9HAB8 311 aa8.83□□□□□ -1
VPS41-201ENST00000265745 MYNNQ9NPC7 610 aa8.83□□□□□ -1
VPS41-201ENST00000265745 RRAGDQ9NQL2 400 aaPredicted RBP8.83□□□□□ -1
VPS41-201ENST00000265745 RASSF1Q9NS23 344 aa8.83□□□□□ -1
VPS41-201ENST00000265745 DNAJB12Q9NXW2 375 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 JKAMPQ9P055 326 aa8.83□□□□□ -1
VPS41-201ENST00000265745 C19orf53Q9UNZ5 99 aaPredicted RBP8.83□□□□□ -1
VPS41-201ENST00000265745 WIF1Q9Y5W5 379 aa8.83□□□□□ -1
VPS41-201ENST00000265745 ANKHD1Q8IWZ3 2542 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 NPIPB8E9PQR5 432 aa8.82□□□□□ -1
VPS41-201ENST00000265745 COQ9O75208 318 aa8.82□□□□□ -1
VPS41-201ENST00000265745 CRCPO75575 148 aa8.82□□□□□ -1
VPS41-201ENST00000265745 RSL1D1O76021 490 aaKnown RBP8.82□□□□□ -1
VPS41-201ENST00000265745 SLITRK5O94991 958 aa8.82□□□□□ -1
VPS41-201ENST00000265745 RCBTB2O95199 551 aa8.82□□□□□ -1
VPS41-201ENST00000265745 PSMG1O95456 288 aa8.82□□□□□ -1
VPS41-201ENST00000265745 UROSP10746 265 aa8.82□□□□□ -1
VPS41-201ENST00000265745 KRT4P19013 534 aa8.82□□□□□ -1
VPS41-201ENST00000265745 CHMP24386 653 aa8.82□□□□□ -1
VPS41-201ENST00000265745 GRK2P25098 689 aa8.82□□□□□ -1
VPS41-201ENST00000265745 IL12BP29460 328 aa8.82□□□□□ -1
VPS41-201ENST00000265745 MC3RP41968 323 aa8.82□□□□□ -1
VPS41-201ENST00000265745 LHX2P50458 406 aa8.82□□□□□ -1
VPS41-201ENST00000265745 DGKQP52824 942 aa8.82□□□□□ -1
VPS41-201ENST00000265745 MRPS22P82650 360 aaKnown RBP8.82□□□□□ -1
VPS41-201ENST00000265745 SRYQ05066 204 aa8.82□□□□□ -1
VPS41-201ENST00000265745 FOXF2Q12947 444 aa8.82□□□□□ -1
VPS41-201ENST00000265745 GAB1Q13480 694 aa8.82□□□□□ -1
VPS41-201ENST00000265745 DAZAP2Q15038 168 aaPredicted RBP8.82□□□□□ -1
VPS41-201ENST00000265745 AAGABQ6PD74 315 aa8.82□□□□□ -1
VPS41-201ENST00000265745 TMEM107Q6UX40 140 aa8.82□□□□□ -1
VPS41-201ENST00000265745 IKBIPQ70UQ0 350 aa8.82□□□□□ -1
VPS41-201ENST00000265745 IFNEQ86WN2 208 aa8.82□□□□□ -1
VPS41-201ENST00000265745 CDC26Q8NHZ8 85 aa8.82□□□□□ -1
VPS41-201ENST00000265745 UBLCP1Q8WVY7 318 aaPredicted RBP8.82□□□□□ -1
VPS41-201ENST00000265745 EFHD2Q96C19 240 aaPredicted RBP8.82□□□□□ -1
VPS41-201ENST00000265745 ELP4Q96EB1 424 aa8.82□□□□□ -1
VPS41-201ENST00000265745 EGLN2Q96KS0 407 aa8.82□□□□□ -1
VPS41-201ENST00000265745 ZFP3Q96NJ6 502 aa8.82□□□□□ -1
VPS41-201ENST00000265745 AMDHD1Q96NU7 426 aa8.82□□□□□ -1
VPS41-201ENST00000265745 GPATCH1Q9BRR8 931 aaKnown RBP8.82□□□□□ -1
VPS41-201ENST00000265745 POLDIP3Q9BY77 421 aaKnown RBP8.82□□□□□ -1
VPS41-201ENST00000265745 GLIPR2Q9H4G4 154 aa8.82□□□□□ -1
VPS41-201ENST00000265745 SRA1Q9HD15 236 aaKnown RBP8.82□□□□□ -1
VPS41-201ENST00000265745 MIEF1Q9NQG6 463 aa8.82□□□□□ -1
VPS41-201ENST00000265745 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
VPS41-201ENST00000265745 SENP1Q9P0U3 644 aa8.82□□□□□ -1
VPS41-201ENST00000265745 OR10H1Q9Y4A9 318 aa8.82□□□□□ -1
VPS41-201ENST00000265745 POLR3HQ9Y535 204 aaPredicted RBP8.82□□□□□ -1
VPS41-201ENST00000265745 AKAP9Q99996 3911 aa8.81□□□□□ -1
VPS41-201ENST00000265745 NINQ8N4C6 2090 aa8.81□□□□□ -1
VPS41-201ENST00000265745 TUBAL3A6NHL2 446 aa8.81□□□□□ -1
VPS41-201ENST00000265745 SMIM23A6NLE4 172 aa8.81□□□□□ -1
VPS41-201ENST00000265745 A6NNC1 897 aa8.81□□□□□ -1
VPS41-201ENST00000265745 CLCA1A8K7I4 914 aa8.81□□□□□ -1
VPS41-201ENST00000265745 C17orf51A8MQB3 221 aa8.81□□□□□ -1
VPS41-201ENST00000265745 H0Y3Z8 333 aa8.81□□□□□ -1
VPS41-201ENST00000265745 COPEO14579 308 aa8.81□□□□□ -1
VPS41-201ENST00000265745 EREGO14944 169 aa8.81□□□□□ -1
VPS41-201ENST00000265745 FADS1O60427 444 aa8.81□□□□□ -1
VPS41-201ENST00000265745 SEC22BO75396 215 aa8.81□□□□□ -1
VPS41-201ENST00000265745 TMIGD3P0DMS9 266 aaPredicted RBP8.81□□□□□ -1
VPS41-201ENST00000265745 EPXP11678 715 aa8.81□□□□□ -1
VPS41-201ENST00000265745 CD1EP15812 388 aa8.81□□□□□ -1
VPS41-201ENST00000265745 ZNF708P17019 499 aa8.81□□□□□ -1
VPS41-201ENST00000265745 PRPH2P23942 346 aa8.81□□□□□ -1
VPS41-201ENST00000265745 TACR1P25103 407 aa8.81□□□□□ -1
VPS41-201ENST00000265745 DPP4P27487 766 aa8.81□□□□□ -1
VPS41-201ENST00000265745 NTSP30990 170 aa8.81□□□□□ -1
VPS41-201ENST00000265745 EVI2BP34910 448 aa8.81□□□□□ -1
VPS41-201ENST00000265745 ART1P52961 327 aa8.81□□□□□ -1
VPS41-201ENST00000265745 IST1P53990 364 aa8.81□□□□□ -1
VPS41-201ENST00000265745 CLDN18P56856 261 aa8.81□□□□□ -1
VPS41-201ENST00000265745 B3GALT5-AS1P59052 145 aa8.81□□□□□ -1
VPS41-201ENST00000265745 SLC18A2Q05940 514 aa8.81□□□□□ -1
VPS41-201ENST00000265745 ZNF155Q12901 538 aaPredicted RBP8.81□□□□□ -1
VPS41-201ENST00000265745 BCL2A1Q16548 175 aa8.81□□□□□ -1
VPS41-201ENST00000265745 FLYWCH1Q4VC44 716 aa8.81□□□□□ -1
VPS41-201ENST00000265745 LIPMQ5VYY2 423 aa8.81□□□□□ -1
VPS41-201ENST00000265745 CLEC6AQ6EIG7 209 aa8.81□□□□□ -1
VPS41-201ENST00000265745 PLXDC2Q6UX71 529 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms